Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1245 ATGGAAGAAGCAAGTAACTGGCTGATACCTACTTCAATATTTCTCCTCTTCTTCTTTCTTGTTTCTAAATACATTCTTCAAATCCATGGCAAACACAAAAACCTACCACCAAGTCCACCTTCTCTACCAATGATAGGTCACCTTCATCTCATAAAACAACCCTTGCACCAAAGCTTTCACAACCTCACACAGAAATATGGCCACATGCTGTTCCTCAAACTCGGCACACGAAAAGTCCTTGTTGTCTCTTCACCTTCCGCCATTGAAGAATGTTTCACAAAGAATGATATCACTTTTGCAAACCGTCCCACCACACTTGCCGCGAAGCTTCTCAACTATGGTAGTAGGACGATAGGATTTGCTTCCTACGGCGACCACTGGCGCAGCCTCCGCCGTCTAACAACCTTGGAGCTCTTCTCTACCAATCGTCTTGCCATGTTTGAAAGCATTCGTGAGGAAGAGATTCGGTTGTTGGTGAAGGAACTCTTTCAAGAGTGCAGCAAAGGTGGTCAAACTCAAAAGTTAAAGGTAGAACTGAGGCCAAAATTTGTGGAAGTCTCTTTCAACATGCTGCTGAGGATGATATCTGGGAAAAGGTACTATGGCAAGGATATTGATGAAGAAGGTAAAGAGTTCCAAATTCTGATGAAGGAGTTCACGGCGCTTCAAGCTAGTTGCTTGAATGACTTCATTCCAATACCAGAATGGATTGATTTTCAAGGCATGAAAAAGAAGATGGTGAATTTGATGAAAAGGGTGGATAGTTTTCTTCAGAAACTACTTGATGAGATCCAAAGGAATAGGAGCATCAGAAGTGATAATAATAATAATGGGAAACTAAATTTGATTGAAGTCATGTTGGACTTGCAAGATAAGGAACCTGAACTCTACACGTATGAAACAATGAAAGGAGTCATTCTGGCATTGCTGATAGCTGGGTCAGAAACTTCGGCTACTACAATGGAATGGGCAGTGTCGCTTCTCCTCAACAATCCACAAACAATGAAGAAGCTTCAACACGAGATATAG 1029 0.4189 MEEASNWLIPTSIFLLFFFLVSKYILQIHGKHKNLPPSPPSLPMIGHLHLIKQPLHQSFHNLTQKYGHMLFLKLGTRKVLVVSSPSAIEECFTKNDITFANRPTTLAAKLLNYGSRTIGFASYGDHWRSLRRLTTLELFSTNRLAMFESIREEEIRLLVKELFQECSKGGQTQKLKVELRPKFVEVSFNMLLRMISGKRYYGKDIDEEGKEFQILMKEFTALQASCLNDFIPIPEWIDFQGMKKKMVNLMKRVDSFLQKLLDEIQRNRSIRSDNNNNGKLNLIEVMLDLQDKEPELYTYETMKGVILALLIAGSETSATTMEWAVSLLLNNPQTMKKLQHEI* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1245 342 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1245 342 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1245 342 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1245 342 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1245 342 PRINTS E-class P450 group I signature 321 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1245 342 PANTHER CYTOCHROME P450 82C3-RELATED 5 342 - -
Amo13g1245 342 PANTHER CYTOCHROME P450 FAMILY PROTEIN 5 342 - -
Amo13g1245 342 Pfam Cytochrome P450 36 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1245 342 SUPERFAMILY Cytochrome P450 36 342 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1245 342 Gene3D Cytochrome P450 28 342 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1245 Amo-Chr13 16196244 16200512 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1245 13 342 Cytochrome P450 AT5G10600 40.476 1.44e-82 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1245 - - adu:107477329 598.586