Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1219 ATGGAAGAGGGTGTTTGGGAATTGGGAGTGGGACCAAGGGGGATGGTGTCTACTGTCTTTAGGAAAACCTTTAATCAAGTTGTCGTTTTAGACAGTGGAAACCTCATGGCCATTGCACAGCAAGTCATCAAGCAGAAGCAGCAACAAGAGCAACAACAACACAACCACCATAGCCATAACCACCACCACCACCAACAGCAGCAGCAGCAGAACCAACAACACTTACTGGGTATTAATCCTCTTTCTCTTCATCCATGGAACAATACACCTCCTTTGGGGTTCCCTCTCACACCAACCAATGATTTTCCCGACCCGTTTCAAGTTGGGTCAGGACCCGACAATCCGGATCCAGCTTTTCACTTCCCTCCTCCATTGGAGCCTCATTCCTCTTCTTCCTTCAGGTTCTCTGATTTCGCCGCCGCTACTTTTGATTCCGATGAGTGGATGGACACACTCATGGCAACCGCCGCGGGAGATTCGACGGACACGTCAACGATCCCAGCGGCGGCGGCGGCGTGGCACAACGCGTCTTCTCCGCCGGCACCACCGCAGGCTCCGGCCACAGTCCAAGGCGGCTTTTCGAGCTTGCCGGAGCCTGATTCGTCGCACCCGCTTCTGAAAGCGCTAACAGAGTTCGCTCTGTTATCGGAAACGGAACCGGATCAAGCTTCAGAGTCGCTGAGCCAGTTGAGAAAATCGGTGTCCCAAAACGGAAACCCAATCCAAAGAGTTTCCTTTTACTTCGCCGAAGCTTTGACCCGAAAATTAACCTTTGAGAGGGAGAAAGATAAGAACTTGGCAATGGTGGAAGCTGCTTCTACTGCCACTACCTCTGAGGAGCTAACACTGTGTTACAAGGCTTTGAATGATGCATGCCCTTATTCAAAATTTGCACATTTAACTGCAAACCAAGCTATTCTTGAAGCCACTGAAGGAGCTTCAAGGATTCACATTGTTGATTTTGGGATTGTTCAAGGGATTCAGTGGGCTGCACTTTTGCAAGCATTTGCTACACGCTCTTCTGGGAAGCCTGAGAGCATAAGGATCTCAGGGATACCGGCTATGGCTCTTGGAACTTCCCCTGCTGCTTCACTTAGTGCCACTGGAAATCGTTTATCCGAGTTTGCGAAGCTTCTTGAGTTGAACTTTGAGTTTAGGCCTATTCTAACCCCTATTCACGAGCTTAATGAGAGTAGCTTCTGTGTTGATCCAAATGAGGCCTTGGCTGTGAACTTCATGCTTCAGTTGTACAATCTTCTTGATGAGACCCCAGATGCTGTTGAGGCTGCACTTCGTTTGGCTAAGTCGTTGAGGCCTAAGATTGTGACTCTTGGTGAGTATGAAGCTAGTTTGACCCGTGGTGGATTCATGAATAGGTTCAAGAATGCTTTGAGATATTACTCATCTGTGTTTGAGTCTCTTGAGCCAAACATGGCACCTGATTCCCCTGAGAGGATGCAGGTGGAGCGGCATCTATTCGGCCGCAGAATTTCCGGTGTCGTTGGGTTGCCAGGGACTGTGAGGGAAAGAATGGAGGATAAGGAGCAGTGGAGGGTTTTCATGGAAAGTTGTGGTTTTGAATCAGTTAGTCTCAGCCATTATGCAATTAGTCAAGCTAAGATCCTTCTGTGGAATTACAGTTACAGTTCTCTTTATTCATTGGTTGAGTCTAAACCTGAGTTTTTGTCCCTGGCTTGGAAAGATGTTCCTCTCTTGACTGTTTCTTCATGGCGTTAA 1737 0.483 MEEGVWELGVGPRGMVSTVFRKTFNQVVVLDSGNLMAIAQQVIKQKQQQEQQQHNHHSHNHHHHQQQQQQNQQHLLGINPLSLHPWNNTPPLGFPLTPTNDFPDPFQVGSGPDNPDPAFHFPPPLEPHSSSSFRFSDFAAATFDSDEWMDTLMATAAGDSTDTSTIPAAAAAWHNASSPPAPPQAPATVQGGFSSLPEPDSSHPLLKALTEFALLSETEPDQASESLSQLRKSVSQNGNPIQRVSFYFAEALTRKLTFEREKDKNLAMVEAASTATTSEELTLCYKALNDACPYSKFAHLTANQAILEATEGASRIHIVDFGIVQGIQWAALLQAFATRSSGKPESIRISGIPAMALGTSPAASLSATGNRLSEFAKLLELNFEFRPILTPIHELNESSFCVDPNEALAVNFMLQLYNLLDETPDAVEAALRLAKSLRPKIVTLGEYEASLTRGGFMNRFKNALRYYSSVFESLEPNMAPDSPERMQVERHLFGRRISGVVGLPGTVRERMEDKEQWRVFMESCGFESVSLSHYAISQAKILLWNYSYSSLYSLVESKPEFLSLAWKDVPLLTVSSWR* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1219 578 Pfam GRAS domain family 207 578 IPR005202 -
Amo13g1219 578 ProSiteProfiles GRAS family profile. 196 578 IPR005202 -
Amo13g1219 578 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 208 577 IPR005202 -
Amo13g1219 578 PANTHER SCARECROW-LIKE PROTEIN 4-RELATED 208 577 - -
Amo13g1219 578 MobiDBLite consensus disorder prediction 174 200 - -
Amo13g1219 578 MobiDBLite consensus disorder prediction 45 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1219 Amo-Chr13 15908144 15910444 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1219 200 578 GRAS Transcription Factor Family AT5G66770 66.667 6.10e-177 511
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Amo13g1219 GRAS 3.9e-110 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1219 - - adu:107477343 743.421