Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1216 ATGGAAGACCACAAGGAGCATCAAAATTTTGTAACCATCGACGTGCATGCCGCCAAAGATATGCTTAACTTGGATGGTTACCACTATCTCGATGTGAGAACTGTTGAGGAATTTAACAAGAGCCATGTTGAGAATGCACAAAATGTTCCGTACATGTTCCTTACAGAACAAGGAAGGGTGCAAAACCCTGATTTTATTGACCAGGTTGAAGCAATATACAAGAAGGATGATCACTTAATTGTGGCTTGCAATAGCGGAGGAAGAGCATCCCGAGCCTGCGTTGACCTGCTTGATCATGGATATAAGCATGTTGTTAACATGGGAGGAGGCTACTCGGCTTGGGTGGATGCTGGTTTTGCCGGGGACAAGCCACCAGAAGAGCTCAAAACCAGTTGCAAGTTCCGTCCTAAGCAATCTTGA 420 0.4524 MEDHKEHQNFVTIDVHAAKDMLNLDGYHYLDVRTVEEFNKSHVENAQNVPYMFLTEQGRVQNPDFIDQVEAIYKKDDHLIVACNSGGRASRACVDLLDHGYKHVVNMGGGYSAWVDAGFAGDKPPEELKTSCKFRPKQS* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1216 139 PANTHER PROTEIN HIGH ARSENIC CONTENT 1, MITOCHONDRIAL-RELATED 5 134 - -
Amo13g1216 139 Pfam Rhodanese-like domain 17 116 IPR001763 -
Amo13g1216 139 Gene3D - 1 120 IPR036873 -
Amo13g1216 139 CDD RHOD 18 115 - -
Amo13g1216 139 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 8 119 IPR036873 -
Amo13g1216 139 PANTHER THIOSULFATE SULFURTRANSFERASE 18 5 134 IPR044684 GO:0003824
Amo13g1216 139 SMART rhod_4 13 120 IPR001763 -
Amo13g1216 139 ProSiteProfiles Rhodanese domain profile. 23 123 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1216 Amo-Chr13 15869910 15871306 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1216 8 127 Sulfurtransferasese or Rhodanese AT5G66170 45.082 8.75e-34 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1216 K22547 - gmx:100794624 228.409