Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1213 ATGCTGCTGCTTCTTTTGACTTGCACCACTCTTTATTCTCTCCATTATCTAAATGTAAGAAGAAGCAAAGCAAACTATAAGCTTCCTCCAGGACCTTCTCCTCTTCCCATCATTGGAAACCTACATGAACTTGGAAATAAACCCCACCATTCTTCAGCCATTCTTGCAAAGATTCATGGCCCCATAATGACTTTGAAGTTGGGACAATTAACCACCATAGTGATCTCTTCAGCTGAAATGGCCAAAATGGTGCTTCAAACCTATGATCAGTTCTTATCGAATCGCACAGTTCCGGAGGCGGCAAGAGTTCACAATCACCATATTCATAGCATTGCCTTCATGCCTATGACACCTCTTTGGAGATCCCTTAGGAAGATATGCAACAATCAGTTATTCGCCAACAAGACTATTGACGCGAGGCAAGACTTGCGTCGCAAGAAAGTGCAAGAACTCCTTGGGGAGATCCATCAAAGTAGCCAAATTGGTGAAGGAGTGGATGTTGGAGAAGCAGCTTTCAAGACTACAATAAATTTATTGTCCAACACAATTTTTTCAATGGATTTGGTTCAATCTTCAGGTTCTGCTGCACGGTTCAAGGATTTAGTTGCCAATATCACCAAAGAGAGTGGAAAACCAAACTTGGCTGATTATTTTCCAGCCTTGAGAATGGTTGATCCACAAAGAATTAAAGCACACAATACCATTTATGCTGGGAAGTTATTGGATATCTTCCATGACTTGATTTACCAAAGGAAGAAGTTGATACTGAAAACAGGTTCTGACACCAATAAGGACATGTTAGAAGCTCTTCTTAACATTTCTCAAGAGAATAGCAAAGAGATGGACAAAATAAATATTGAACATTTAATGCTGACCTTATTTGTTGCTGGAACAGATACAATCACATCTACATTAGAATGGGCAATGACTGAATTACTCAGCAATCCAGACACTATGACAAAGGCTAAAAGGGAGCTTGAAGAAACAATTGGAAAGGGAAACCAAGTTGAGGAATCAGACATAGCAAGATTACCATATTTACAAGCAATATTGAAAGAGACATTTCGTTTGCACCCTTCAGTGCCTTTTTTGATCCCAAGAAAAGCTGACACTGATGTAGAAATCAATGGCTATACCATACCAAAAGGTTCACAAGTGCTAATCAATGTTTATGCTATTGGAAGGGATTCAAATGTATGGAAGAATGACACAAATTTGTTCTCACCAGAGAGGTTCTTGGGATTAGAAACTGATGTTAGAGGGAGGCATTTTGAGTTGATACCATTTGGTGCTGGTAGAAGAATATGTCCTGGTTTAACATATGCTATGAGGATTTTGTTCTTGATGTTAGGTTCACTGGTTAATTGTTTTGATTGGAAGCTTGAAAATGATTCAAAAGCTGAGGATATTGATAAGGAAGAAGAATTTGGAATAACATTAAGAAAGTGTAAACCCCTTAGATCCATTCCAATCAAAGTAAATAACTAA 1488 0.3844 MLLLLLTCTTLYSLHYLNVRRSKANYKLPPGPSPLPIIGNLHELGNKPHHSSAILAKIHGPIMTLKLGQLTTIVISSAEMAKMVLQTYDQFLSNRTVPEAARVHNHHIHSIAFMPMTPLWRSLRKICNNQLFANKTIDARQDLRRKKVQELLGEIHQSSQIGEGVDVGEAAFKTTINLLSNTIFSMDLVQSSGSAARFKDLVANITKESGKPNLADYFPALRMVDPQRIKAHNTIYAGKLLDIFHDLIYQRKKLILKTGSDTNKDMLEALLNISQENSKEMDKINIEHLMLTLFVAGTDTITSTLEWAMTELLSNPDTMTKAKRELEETIGKGNQVEESDIARLPYLQAILKETFRLHPSVPFLIPRKADTDVEINGYTIPKGSQVLINVYAIGRDSNVWKNDTNLFSPERFLGLETDVRGRHFELIPFGAGRRICPGLTYAMRILFLMLGSLVNCFDWKLENDSKAEDIDKEEEFGITLRKCKPLRSIPIKVNN* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1213 495 SUPERFAMILY Cytochrome P450 22 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1213 495 PRINTS E-class P450 group I signature 285 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1213 495 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1213 495 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1213 495 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1213 495 PRINTS E-class P450 group I signature 348 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1213 495 PRINTS E-class P450 group I signature 56 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1213 495 Pfam Cytochrome P450 29 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1213 495 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Amo13g1213 495 PANTHER CYTOCHROME P450 FAMILY PROTEIN 2 494 - -
Amo13g1213 495 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1213 495 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1213 495 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1213 495 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1213 495 Gene3D Cytochrome P450 15 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1213 495 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 2 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1213 Amo-Chr13 15854168 15855792 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1213 1 492 Cytochrome P450 AT2G45550 45.473 1.45e-154 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1213 - K23810 gmx:100805772 610.527