Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1207 ATGCACAAGCGTCGAACCATGCTGGGGAGGATGCTCCATGCTTTTGAACAAGTAAAGTTGCTCCATGATGTTGCGGAGAAAATAGACAGCATCAAAGCCAGTGTCAATGAAATAACAGAAAACAAGATGAAACTCACCAATGTCTTTCAACAAGAAGGTGAATCATCATCAGCAAGAGAGGATGAGGAGAGGGTGCTGTTGCTGCACAAGAGAAGAAGAAATGTGGAGGAACATGATGTCGTTGGTTTTGTTCGTGAATCAAAGGCAGTGATCCAGCTGCTTAAGGAAGAGACTTCCCAGAGCAATGTTGTCTCCATCATCGGTATGGGTGGCTTGGGCAAAACCACCCTTGCCCGAAAGGTCTATAACGGCGACGAGGTGAAGTCATATTTCAAATGTCGTGCATGGGTCTATGTGTCGAATGAGTACAGAGTTAAGGAGCTTTTGCTTGGCCTCATCAAGTGTTTGATGCCTAACGCTGAGAATGATAATGGGAAGAAAAAGAAAGGAAAGAAACAGAAGGGAAGAGAGAAACCAGGTGACCTGTCTAACTTGGATATCGACGAGCTAAAGCTAATGGTGCAGAATTTCTTGACCAAGAAACGGTATCTGGTCGTCCTTGATGACCTCTGGAAGACTCAAGACTGGGATGAGGTACAAGATGCTTTTCCAAACGACAACAATGGTAGTAAAATACTCATCACTAGCCGTTTGAAAGAGGTGGAATCGCATACGAGTCCATATCCTCCTTATTACCTTCAATTCCTCGGTGATGATGAAAGTTGGGAACTCTTCTCCAAGAACGTGTTTCGAGGAGAAGAGTGTCCTTCTGATATAGAGAATCTTGGAAAACAAATGATCAAAAGTTGCGGAGGTTTGCCACTCTCCATTGTTGTTTTGGCAGGTTTAATGGCAAACAAGAGGAAGTCACACAGGGAATGGTGCAGAGTTGTGGGACATGTCAACTGGTATCTTACTCAAGATGAGTCCCAAGTTAAGGACATTGTACTCAAACTCAGCTACGACAACTTGCCTACAAGACTAAAGCCGTGCTTTCTGTATTTCGGGATCTACCCTGAAGATTTTGAGATAGGTGTAAGGTCATTGCTGCAAAAATGGGTGGCTGAGGGATTTATTCAACAAACTGGGACCAGAAATGCAGAGGATGTTGCTGAAGATTACTTGTATGAGCTCATTGATGGTAGCTTGGTTCAAGCATCGCGAGTGAACTTTAATGGAGATGTGAAGGCATGTCGCATCCATGATCTTCTTCGTGATCTTTGCATATCTGAGAGCAAAGAGGACAACCTTTTTGAGGTTTGCACAAATAATAACATCTTGGAGAGATCAAAACCTCGCAGGCTTGCAATCCAATGTGGCATGCATCGTTATGTTTCTTCAAGCAACAATGACCATTCATGTTACGATTTTACCCCCAGTGAGGTGAAATGGCTTTTTAAATTGTTCAAATTGGTTCGGGTATTAGATCTTGGGGAAAATTATTGCAGCAAAGTTCCGGATTCTATATCTGCACTTCAATGTTTACAAACTTTGGAAATATACAATCACAATTACTACTTAGGTGCTGTGTTGTGGCTTTCAATATTTTTGCCCAGTGGACTATGGAGCCTGAAACAACTTAGGCATCTGAATACTAATGGAATCATGATCCTCCGTGGCCACCATGGTTCAAAAGAAGAAGATGAAATTATGTGGAATCTTCAAACCATCTATTACATTACATTCAATAGACAGATTGCATGCTTGTTAGAGAAAGGAAGGTTTCCCAAGCTACAAAAGTTGGGTGTGCACATCTCCTGGATCCCCAAAGATAATGTGCATGAATTGTTGTCAAGCTTACAACGATTAAGTAGTCATCTGAACAAGTTAAAACTTTTCATTGAATGGAAGCAATATAAGGTTTCAGAGTCCTCAAACTTAAAGCACATGGAATGGCACATCGGTTGCAAGCCAATTGAATTGTTACAGACCCTGCAGCAGTTCTCAAATCTGAGCACATTGAAAGTTATAGGAGCTTTGGACCTTGCAATGTGTGATATAGAGTTTCCTCCATGCATTACAAAATTAACATTGACGGGAATTAGCTTCATGAATGATGATGGGATAAATGCCATTGCTAATCTTACTAGACTCCAACGTTTGAGCTTGCATGGAGCACTTGAATTTCATGATTCCTTTGAGATTAATTGCAGTGCCGGTAGCTTCAAACGGCTCCAGGATTTTTTGATGCTGGGGCTCCAAGTTCATAGCTAG 2274 0.4186 MHKRRTMLGRMLHAFEQVKLLHDVAEKIDSIKASVNEITENKMKLTNVFQQEGESSSAREDEERVLLLHKRRRNVEEHDVVGFVRESKAVIQLLKEETSQSNVVSIIGMGGLGKTTLARKVYNGDEVKSYFKCRAWVYVSNEYRVKELLLGLIKCLMPNAENDNGKKKKGKKQKGREKPGDLSNLDIDELKLMVQNFLTKKRYLVVLDDLWKTQDWDEVQDAFPNDNNGSKILITSRLKEVESHTSPYPPYYLQFLGDDESWELFSKNVFRGEECPSDIENLGKQMIKSCGGLPLSIVVLAGLMANKRKSHREWCRVVGHVNWYLTQDESQVKDIVLKLSYDNLPTRLKPCFLYFGIYPEDFEIGVRSLLQKWVAEGFIQQTGTRNAEDVAEDYLYELIDGSLVQASRVNFNGDVKACRIHDLLRDLCISESKEDNLFEVCTNNNILERSKPRRLAIQCGMHRYVSSSNNDHSCYDFTPSEVKWLFKLFKLVRVLDLGENYCSKVPDSISALQCLQTLEIYNHNYYLGAVLWLSIFLPSGLWSLKQLRHLNTNGIMILRGHHGSKEEDEIMWNLQTIYYITFNRQIACLLEKGRFPKLQKLGVHISWIPKDNVHELLSSLQRLSSHLNKLKLFIEWKQYKVSESSNLKHMEWHIGCKPIELLQTLQQFSNLSTLKVIGALDLAMCDIEFPPCITKLTLTGISFMNDDGINAIANLTRLQRLSLHGALEFHDSFEINCSAGSFKRLQDFLMLGLQVHS* 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1207 757 Gene3D Ribonuclease Inhibitor 442 747 IPR032675 -
Amo13g1207 757 Gene3D - 65 247 IPR027417 -
Amo13g1207 757 PRINTS Disease resistance protein signature 290 304 - -
Amo13g1207 757 PRINTS Disease resistance protein signature 103 118 - -
Amo13g1207 757 PRINTS Disease resistance protein signature 713 729 - -
Amo13g1207 757 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 68 355 IPR027417 -
Amo13g1207 757 SUPERFAMILY RNI-like 479 732 - -
Amo13g1207 757 Gene3D - 255 340 IPR042197 -
Amo13g1207 757 Gene3D - 341 432 IPR036388 -
Amo13g1207 757 Pfam NB-ARC domain 89 342 IPR002182 GO:0043531
Amo13g1207 757 PANTHER DISEASE RESISTANCE PROTEIN RP 23 711 IPR044974 GO:0006952
Amo13g1207 757 PANTHER - 23 711 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1207 Amo-Chr13 15714368 15716746 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1207 104 427 WRKY Transcription Factor Family AT5G45050 25.994 4.55e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1207 - - adu:107477359 1075.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1207 13 15714368 15716746 Amo13g1207 13 15714368 15716746 ECH