Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1172 ATGGCAGATACTGTGATTTCCTTTGTCCTTGATAACTTGTCCCAATTGCTAGCACGCGAAGCCAGTCTGCTCTGTGGTGTGGATGACAGGGTTAGATCCCTTCAAAGTGTGCTCAACATGATGAACGAGCATCTCCAAACCTCTGAAGGAAAAACCAAGAAAGGAATAGAGAAAGAAGTTCTTCGCCAGATCAGAGATGTTGCACATGAAGCTGAGGATGTCATCGACACCTTTGTTGTCAACGTGGCTATACACAAGCGTAGAACCAAGCTGGGGAAGATGCTCCATGGTCTTGAGCATGCAAAGTTGCTCCATGATGTGGCTGAGAAAATAGACAGCATCAAAGCCACTGTCAATGATATAAGAGATAACAAGATCAAGCTCACCGATGTCGTCCCACAAGAAAGTGGATCATCGACGTCAACAAGAGAAGAGGAGGAGAGGGTTCTGTTGATGCACAAGAAGAGAAGAATTGTGGAAGAACATGATGTAGTTGGTTTTGTTCGTGAATCCAAGGCAGTCATCCAGCGGCTTAAGGAAGAGAGTTCCCAAAGCAATGTTGTCTCCATCATCGGTATGGGTGGCTTGGGCAAAACCACCCTTGCCCGGAAGGTCTATAACAGCGGTGAGTTGAAGCCATATTTCAAATGTCGTACATGGGTTTATGTGTCAAATGACTGCAGAGTTAAGGACCTCTTGATTAGCCTTATCAAGTCTTTGATGCCTAACCTTGAACACGAGCATGGGAGGAAAAAGAAGGGAAAGAAACAAAAGGGAACAGAGAAACCAGGTGATCTCTCTAGCTTGGATGTGGATGACCTAAAGCTCAAGGTGCGAGATTTCTTGACCATGAAAAGGTATCTGATAGTCCTTGATGACCTCTGGAAGACTCAAGATTGGGATGAGATACAAGATGCTTTTCCAAACGACAATAATGGTAGTAAAATATTAATTACTAGCCGTTTGAAAGAGGTGGCATCCCATACAAGTCCATATCCTCCTTATTACCTTCAATTCCTCGGTGATGATGAAAGTTGGGAACTCTTTTCCAGGAGAGTGTTTCGAGGAGAAGAGTGTCCTTCTGATATAGAGGATCTTGGAAAACAAATGGTTAAAAGTTGTGGCGGTTTGCCACTCTCCATTGTTGTTTTGGCAGGGTTACTTGCAAACAAGAGGAAGTCACACGAGGAATGGTCCAAAGTTGAGGGACATGTCAACTGGTTTCTTACTCAAGAAGATAAGACCCAAGTCAAGGACATACTCAAACTCAGCTACGACAACTTGCCTACAAAACTAAAGCCGTGCTTTCTGTATTTCGGGATCTACCCTGAAGATTTTGAGATACCTGTAAGGTCATTGCTGCAAAAATGGGTGGCTGAGGGATTTATTCGACAAACTGGGACCAGAAATGCAGAGGATGTTGCTGAAGATTACTTGTATGAGCTCATTGATCGTAGCTTGGTTCAAGCATCGCGAGTGAATGTTAATGGAGATGTGAAGGCATGTCGCGTCCATGATCTTCTTCGAGATCTTTGCATATCTGAGAGCAAAGAGGACAAGCTTTTTGAGGTTTGCACAAATAATAACATTTTGGAGAGATCAAAACCTCGCAGGCTTTCTATCCAATGTGGCATGCATCGCTATGTTTCTTCAAGCGACAATGACCATTCATGTGTCCGATCTTTGTTTTGCCTTGACCCAACAAGGTATGTTTTTACTCCCAGTGAGATGAAATGGCTCTTTAAATTGTTCAAATTGGTTCGGGTATTAGATCTTGGAGAAAACTTTTTCCGCAAAGTCCCTTCCAACTTGGGCTTATTTATCCATTTAAGGTATTTAAGAATACGCTCAGAAGGTGATTCCTTCAGCTTCAAGGTTCCGGATTCTATATGCACACTTCAAAATTTACAAACTTTGGAAATATACAGTGTTAAGCCGATATTTTTGGTCATTGGATTGATATTTTCAACATATTTGCCCAGTGGATTATGGAACATGAAACAACTTAGGCATTTGAATACTAATGGAAGCATCATCCTACATGGCCACCATCGTTCAAAAGCAGGTGATCAAGTTATGTGGAATCTTGAAAGCATGTACTACATTAAATTCAATAGACAGATTGCACACATGTTAGAGAAAGGAAGCTTTCCCAAGCTACGAAAGTTGGGTCTGCACATATCCTCAGTCCAGAAAAATAATGTGCATGAGTTGTTGTCAAGCCTACAACGTTTAATTCATCTAAACAAGTTACAAATTTCCATTAAATGGAAGAAAACACGGCGCGGAATGCCCTTAAACTACAAGCAGCACATGGAATGGCACGTCGGGGTCAAGCCAATTGAATTGTTACAGAGCCTGCAGCAGTTGTCAAATCTGAGCACATTAAAAGTTCTCAGAGCTTTCGACATTGCAACGTGTGATATTGCATTTCCTCCATTCATTACAAAATTAACGTTGACAGGCATTAGCTTCATGAATGATGATGGGATGAATGCCATTGGTAATCTTACTAGACTTAGACGTTTGAGATTGTATGGAACACTTGCATTTGATATTCTCTTTGATATTAATTGCACTGCAAACAGTTTCCCACAGCTCCATGTTTTTGAGATGGAGTGGCTGAATGTTGATAACTGGAAATTAGGCAATGGTGCAATGCCATGCCTTCAAACTCTGCTTATCAATGTCTGTAAAAGATTGGACGATCTCCCAGATGAACTGTGGTCTTTGACTTCCCTGAGACAAGTAAAAGTTCTGACACCCTCCCCAGCATTGTGTCTTGCACTAGAAAAGTTGGAAATGAAGAATGGATGTGAGCTCGTAATCGAATAG 2835 0.4183 MADTVISFVLDNLSQLLAREASLLCGVDDRVRSLQSVLNMMNEHLQTSEGKTKKGIEKEVLRQIRDVAHEAEDVIDTFVVNVAIHKRRTKLGKMLHGLEHAKLLHDVAEKIDSIKATVNDIRDNKIKLTDVVPQESGSSTSTREEEERVLLMHKKRRIVEEHDVVGFVRESKAVIQRLKEESSQSNVVSIIGMGGLGKTTLARKVYNSGELKPYFKCRTWVYVSNDCRVKDLLISLIKSLMPNLEHEHGRKKKGKKQKGTEKPGDLSSLDVDDLKLKVRDFLTMKRYLIVLDDLWKTQDWDEIQDAFPNDNNGSKILITSRLKEVASHTSPYPPYYLQFLGDDESWELFSRRVFRGEECPSDIEDLGKQMVKSCGGLPLSIVVLAGLLANKRKSHEEWSKVEGHVNWFLTQEDKTQVKDILKLSYDNLPTKLKPCFLYFGIYPEDFEIPVRSLLQKWVAEGFIRQTGTRNAEDVAEDYLYELIDRSLVQASRVNVNGDVKACRVHDLLRDLCISESKEDKLFEVCTNNNILERSKPRRLSIQCGMHRYVSSSDNDHSCVRSLFCLDPTRYVFTPSEMKWLFKLFKLVRVLDLGENFFRKVPSNLGLFIHLRYLRIRSEGDSFSFKVPDSICTLQNLQTLEIYSVKPIFLVIGLIFSTYLPSGLWNMKQLRHLNTNGSIILHGHHRSKAGDQVMWNLESMYYIKFNRQIAHMLEKGSFPKLRKLGLHISSVQKNNVHELLSSLQRLIHLNKLQISIKWKKTRRGMPLNYKQHMEWHVGVKPIELLQSLQQLSNLSTLKVLRAFDIATCDIAFPPFITKLTLTGISFMNDDGMNAIGNLTRLRRLRLYGTLAFDILFDINCTANSFPQLHVFEMEWLNVDNWKLGNGAMPCLQTLLINVCKRLDDLPDELWSLTSLRQVKVLTPSPALCLALEKLEMKNGCELVIE* 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1172 944 Gene3D - 5 116 - -
Amo13g1172 944 PANTHER DISEASE RESISTANCE PROTEIN RP 45 942 IPR044974 GO:0006952
Amo13g1172 944 PANTHER - 45 942 - -
Amo13g1172 944 SUPERFAMILY L domain-like 503 918 - -
Amo13g1172 944 Gene3D - 430 514 IPR036388 -
Amo13g1172 944 Pfam NB-ARC domain 172 427 IPR002182 GO:0043531
Amo13g1172 944 Gene3D - 145 331 IPR027417 -
Amo13g1172 944 Pfam Rx N-terminal domain 5 90 IPR041118 -
Amo13g1172 944 Gene3D Ribonuclease Inhibitor 519 682 IPR032675 -
Amo13g1172 944 Gene3D - 339 429 IPR042197 -
Amo13g1172 944 PRINTS Disease resistance protein signature 187 202 - -
Amo13g1172 944 PRINTS Disease resistance protein signature 794 810 - -
Amo13g1172 944 PRINTS Disease resistance protein signature 374 388 - -
Amo13g1172 944 CDD RX-CC_like 2 123 IPR038005 -
Amo13g1172 944 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 439 IPR027417 -
Amo13g1172 944 Gene3D Ribonuclease Inhibitor 715 935 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1172 Amo-Chr13 15247381 15250602 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1172 188 532 WRKY Transcription Factor Family AT5G45050 24.930 2.01e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1172 - - adu:107477359 1342.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1172 13 15247381 15250602 Amo13g1172 13 15247381 15250602 ECH