Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1171 ATGGCAGATGGTGTGGTTTCCTTCCTTCTAGAAAACTTGTCCCAGCTGCTGGCAAGTGAAGCCAAGCTACTATGTGGCTTGGAAGGTAGAATCAGATCCCTCCACAGTGAGCTCGAAATTATAAACGTGCTCCTCAAAAGCTTCGAAGGGAAGAGGAACAAGAAGGAGATGGAGCAAGTAGTTGCCAACCAGATCAGAGATGTTGCTCAGGAAGCTGAGGATGTCATCGACACCTTCGTTGCCAACGTGGCCATGCACAAGAGGAGATCCAAGCTAGGGAGAATGTTCCATGGTGTTTCCCACACAAAGCTGCTTCATGATGTTGCTGAGAAAATAGAAAGCATAAAAGCCACTCTTAGTGATATACGTGAGAACAAGATCAAGTATGATGTCTTCCAACAAGAAAGTGAATCATCGTCGACAAGAGAAGATGAGGAGAGGATGCAGTTGTTGCACAAGAGGAGAAGAGATGTGGAGGAACATGATGTAGTTGGTTTCGTCCGGGAATCCAAGACAGTTATCCAGCTGCTTAGTGAAGATGGATCAAGGAGCAATGTTGTCTCCATCATTGGTATGGGTGGGTTGGGCAAAACCACCCTTGCTCGAAAGGTCTATAACAGCGATGAGGTGAAGGCATATTTCAATTGTCGTGCATGGGTTTATGTTTCAAATGATTGTAGAGTTAAGGATCTTCTACTTGGCATTCTCAACTGTTTGATGCCTAACCCTGAATATGAGTGTAGTAGCAAAAAGAAGGGAAAAAAGAAAAAGAGCAAAGAGAAACCAAGAGACCTTAATACTTTAAGCGAGGATGAACTGAAGCAAATAGTGCAGGACTGCTTGAAGAAGAAGAGGTATCTACTAGTCCTTGATGACTTGTGGAAAGCTCAAGATTGGGATGAGGTACAAGATGCTTTTCCAAACAATAATAATGGTAGTAAAATACTAATTACGAGTCGTTTGAAAGAGGTGGCTATCCACACTAGTCAAGATCCTCCTTTCTATCTTCAATTACTTACTGATGAAGAAAGTTGGGAACTCTTCTCCAAGAGAGTTTTTCGTGGAGAAGAGTTCCCATTTGATCTAGAGGATCTAGGCAAACAAATAGTCAAAAGTTGTCATGGTTTGCCACTTTCCCTTGTTGTTTTGGCAGGGCTTCTTGCACATAAGGAGAAGTCATACCGAGAATGGTCCAAAGTGGTAGGACATGTTAATTGGTATCTCACTCAAGATGAAACCCAAGTCAAGGACATCGTACTCAAACTCAGTTACGACAACTTGCCCAGAAGATTAAAACCATGTTTCCTGTATCTTGGGATCTTCCCTGAAGACTATGAGATACCTGTTAGGCAACTGCTTGAACTATGGGTTGCTGAGGGATTTATACAACAATCTGGGACCAGATATCCTGAGGAAGTTGCTGAAGATTATTTGTATGAGCTCATTGAACGTAGTTTGGTTCAAGTAGCACAAATGAAGAGTTTTAGTGGAGGTGTCAAAACATGTCGCATCCATGATCTTCTTCGAGATCTGTGCATTTCTGAGAGCAAAGAAGACAAGCTTTTTGAAATTTGCATGGATAATAACATTTTGGCAAGAAGACAACCTCACAGGCTATCTCTTCATTGCAATGTGCCTCACTATGTTTCTTCAAGCAACAATGACCATTCAGTTGTACGTTCTATGTTTTGCTTTAACCAAGACTATCATTTGACTCCAAGCAACTGGAAACGGCTTTTCAAATCCTTCAAATCTGTTCGAGTATTAGATTTGGGCAGCAACCATTGTCTAAAGGTCCCTTCTAATTTGAGTTTATTTATCCATTTAAGGTATCTAAGAATATACTCGCAACATACCCGCATCATTCCAGATTCTATATGCATGCTTCAGAATCTACAGACACTGGACATAGCAGGGCCTTGTAGGATGGTTGTCTTGATTTCTTTCCCCAATGGACCATGGAAACTAAAACAACTAAGGCACTTGCATACAATTAGGCCCATATTGCTACGTGGCAACCATCATTCAAGAGCAGTTGCTGAAGTTATGTGGAATCTTCAAACCATCTCTTCCATTGCACTCAATAGGCAAGTAGCATATCTATTTGAGAAAGGAAGCTTTCCAAAGCTTCAAAAGTTGGGTTTGCTAATCTCCTCAGGCAAGAAGGGGGAACTGCACACACTGTTGCCAATCCTACAACAATTAAGTCATCTGAATAAGTTACGAGTTTCCTTCCAATGGAAGAAGTCAGAAGTGCATTCATCCGCAAGGAACCACATGGAATGGCACATTGGATGCAAGCCACATGAACTGTTACAAAGCCTGCAACAGTTAACTAATCTGAGTTCATTGAAAATTATCAATGCTTGGGACCTTCCAACATGTCCTGTTGCATTTCCTCCATGCATTACAAAGCTAACTCTGTCAGGCATCACTTGCATGAATGAGGATGGGATGAATGCCATGGGAAGTCTCACTAGACTTCGAATTTTGAGATTATATGGGGGATATTCTTCAAATGATTCCTTTGAGATTAATTGTTCTTCAAGTAACGGGTTCCCACAACTGCAGGTGTTTGAGATGAAAAAGTTGAATGTTGGTAACTGGAAATTAGCCAACGGTGCAATGCCATACCTTGAGCACTTGCTGATCGATTTTTGTCGACAGTTGGATGATCTCCCAAATGAATTGTGGTCTTTGAGTGCCCTGAGACAAGTGCATGTTTTGCTACCCTCTGAAGCATTGTCTCTCAGACTAAAAGATATTGAAATGAAGGATGGGTGTGAGCTCGTAATCAGAGAGGGTAATTCCTATTTCTATGGAATTTAG 2829 0.4157 MADGVVSFLLENLSQLLASEAKLLCGLEGRIRSLHSELEIINVLLKSFEGKRNKKEMEQVVANQIRDVAQEAEDVIDTFVANVAMHKRRSKLGRMFHGVSHTKLLHDVAEKIESIKATLSDIRENKIKYDVFQQESESSSTREDEERMQLLHKRRRDVEEHDVVGFVRESKTVIQLLSEDGSRSNVVSIIGMGGLGKTTLARKVYNSDEVKAYFNCRAWVYVSNDCRVKDLLLGILNCLMPNPEYECSSKKKGKKKKSKEKPRDLNTLSEDELKQIVQDCLKKKRYLLVLDDLWKAQDWDEVQDAFPNNNNGSKILITSRLKEVAIHTSQDPPFYLQLLTDEESWELFSKRVFRGEEFPFDLEDLGKQIVKSCHGLPLSLVVLAGLLAHKEKSYREWSKVVGHVNWYLTQDETQVKDIVLKLSYDNLPRRLKPCFLYLGIFPEDYEIPVRQLLELWVAEGFIQQSGTRYPEEVAEDYLYELIERSLVQVAQMKSFSGGVKTCRIHDLLRDLCISESKEDKLFEICMDNNILARRQPHRLSLHCNVPHYVSSSNNDHSVVRSMFCFNQDYHLTPSNWKRLFKSFKSVRVLDLGSNHCLKVPSNLSLFIHLRYLRIYSQHTRIIPDSICMLQNLQTLDIAGPCRMVVLISFPNGPWKLKQLRHLHTIRPILLRGNHHSRAVAEVMWNLQTISSIALNRQVAYLFEKGSFPKLQKLGLLISSGKKGELHTLLPILQQLSHLNKLRVSFQWKKSEVHSSARNHMEWHIGCKPHELLQSLQQLTNLSSLKIINAWDLPTCPVAFPPCITKLTLSGITCMNEDGMNAMGSLTRLRILRLYGGYSSNDSFEINCSSSNGFPQLQVFEMKKLNVGNWKLANGAMPYLEHLLIDFCRQLDDLPNELWSLSALRQVHVLLPSEALSLRLKDIEMKDGCELVIREGNSYFYGI* 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1171 942 Gene3D - 338 423 IPR042197 -
Amo13g1171 942 PANTHER - 51 932 - -
Amo13g1171 942 Pfam Rx N-terminal domain 5 91 IPR041118 -
Amo13g1171 942 CDD RX-CC_like 2 124 IPR038005 -
Amo13g1171 942 Gene3D Ribonuclease Inhibitor 515 755 IPR032675 -
Amo13g1171 942 SUPERFAMILY L domain-like 503 907 - -
Amo13g1171 942 PRINTS Disease resistance protein signature 373 387 - -
Amo13g1171 942 PRINTS Disease resistance protein signature 186 201 - -
Amo13g1171 942 PRINTS Disease resistance protein signature 581 597 - -
Amo13g1171 942 Gene3D - 151 332 IPR027417 -
Amo13g1171 942 PANTHER DISEASE RESISTANCE PROTEIN RP 51 932 IPR044974 GO:0006952
Amo13g1171 942 Gene3D - 424 514 IPR036388 -
Amo13g1171 942 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 438 IPR027417 -
Amo13g1171 942 Gene3D Ribonuclease Inhibitor 758 922 IPR032675 -
Amo13g1171 942 Gene3D - 1 129 - -
Amo13g1171 942 Pfam NB-ARC domain 172 426 IPR002182 GO:0043531
Amo13g1171 942 Coils Coil 105 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1171 Amo-Chr13 15242328 15245703 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1171 187 511 WRKY Transcription Factor Family AT5G45050 25.526 5.19e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1171 - - adu:107477359 1148.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1171 13 15242328 15245703 Amo13g1171 13 15242328 15245703 ECH