Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1155 ATGGAAGAAGCAAGTAACTGGCTGATACCTACTTCAATATTTCTCCTCTTCTTCTTTCTTGTTTCTAAATACATTCTTCAAATCCATGGCAAACACAAAAACCTACCACCAAGTCCACCTTCTCTACCAATGATAGGTCACCTTCATCTCATAAAACAACCCTTACACCAAAGCTTTCACAACCTCACACAGAAATATGGCCACATGCTGTTCCTCAAACTCGGCACACGAAAAGTCCTTGTTGTCTCTTCACCTTCCGCCATTGAAGAATGTTTCACAAAGAATGATATCACTTTTGCAAACCGTCCCACCACACTTGCCGCCAAGCTTCTCAACTATGGTAGTAGGACGATAGGATTTGCTTCCTACGGCGACCACTGGCGCAGCCTCCGCCGTCTAACAACCTTGGAGCTCTTCTCTACCAATCGTCTTGCCATGTTTGAAAGCATTCGTGAGGAAGAGATTCAGTTGTTGCTGAAGGAACTCTTTCAAGAGTGCATCAAAGGTGGTCAAACTCAAAAGTTAAAGGTAGAACTGAGGCCAAAATTTGTGGAAGTCTCTTTCAACATGCTGCTGAGGATGATATCTGGGAAAAGGTACTATGGCAAGGATATTGATGAYGAAGGTAAAGAGTTCCAAATTCTGATGAAGGAGTTCACGGCGCTTCAAGCTAGTTGCTTGAATGACTTCATTCCAATACCYGAATGGATTGATTTTCAAGGCATGAAAAAGAAGATGGTGAATTTGATGAAAAGGGTGGATAGTTTTCTTCAGAAACTACTTGATGAGATCCAAAGGAATAGGAGCATCAGAAGTGATAATAATAATAATGGGAAACTGAATTTGATTGAAGTCATGTTGGACTTGCAAGATAAGGAACCTGAACTCTACACGTATGAAACAATGAAAGGAATCATTCTGGCATTGCTGATAGCTGGGTCAGAAACTTCGGCTACTACAATGGAATGGGCAGTGTCGCTTCTCCTCAACAATCCACAAACAATGAAGAAGCTTCAACACGAGATAGAAACACACGCAGGCCATGATCAACTCTTGAATGAATCAAACGCTTCCAAAATGAAGTACCTGCAGAACATAATCACTGAGACACTTCGCATATACCCCGTGGCACCACTTCTCTTACCTCACGAGTCTTCAAGTGATTGCAATGTTTGTGGTTATGACATACCGAAAGGGACAATGCTGCTTGTGAACTTGTGGACACTGCAGAGGGACCCTAACTTATGGGCTGATCCTACAAYATTTGTTCCAGAAAGATTTGATGATAATGGAGATGGTAGTAAAGTTTGTTACAATYTGATTCCATTTGGTGTTGGAAGACGAGCTTGCCCTGGAGCTGTTTTGGCAAAACATGTTATGGGACATGCATTAGGAGCACTGTTTCAGTGTTTTGAATGGGAAAAAATTGAGGATCAAGTGGACATGGCAGAGGGAATAGGGCTTACGTTGCCCAAAGCTCAACCTTTGGTTGCTTTTTGCAAGCCACGTCAAGAAATGGTTAAGGTTCTATCCAATATATAA 1542 0.4189 MEEASNWLIPTSIFLLFFFLVSKYILQIHGKHKNLPPSPPSLPMIGHLHLIKQPLHQSFHNLTQKYGHMLFLKLGTRKVLVVSSPSAIEECFTKNDITFANRPTTLAAKLLNYGSRTIGFASYGDHWRSLRRLTTLELFSTNRLAMFESIREEEIQLLLKELFQECIKGGQTQKLKVELRPKFVEVSFNMLLRMISGKRYYGKDIDDEGKEFQILMKEFTALQASCLNDFIPIPEWIDFQGMKKKMVNLMKRVDSFLQKLLDEIQRNRSIRSDNNNNGKLNLIEVMLDLQDKEPELYTYETMKGIILALLIAGSETSATTMEWAVSLLLNNPQTMKKLQHEIETHAGHDQLLNESNASKMKYLQNIITETLRIYPVAPLLLPHESSSDCNVCGYDIPKGTMLLVNLWTLQRDPNLWADPTXFVPERFDDNGDGSKVCYNLIPFGVGRRACPGAVLAKHVMGHALGALFQCFEWEKIEDQVDMAEGIGLTLPKAQPLVAFCKPRQEMVKVLSNI* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1155 513 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1155 513 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1155 513 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1155 513 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1155 513 SUPERFAMILY Cytochrome P450 36 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1155 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Amo13g1155 513 PANTHER CYTOCHROME P450 FAMILY PROTEIN 6 512 - -
Amo13g1155 513 PANTHER CYTOCHROME P450 82C3-RELATED 6 512 - -
Amo13g1155 513 Pfam Cytochrome P450 36 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1155 513 PRINTS E-class P450 group I signature 405 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1155 513 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1155 513 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1155 513 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1155 513 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1155 513 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1155 513 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1155 513 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1155 513 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1155 513 Gene3D Cytochrome P450 27 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1155 Amo-Chr13 15022754 15027102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1155 12 510 Cytochrome P450 AT4G37330 46.123 4.12e-152 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1155 - - gmx:100794610 679.093