Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1148 ATGGACTTGGTAAGTTTTGTGATGCTGCTGCTTCTTCTTTTGACTTGCACCACTCTTTATTCTCTCCATCATCTAAATGTAAGAAGAAGCAAAGCAAACTATAAGCTTCCTCCAGGACCTTCTCCTCTTCCCATCATTGGAAACCTACATGAACTTGGAAATAAACCCCACCATTCTTCAGCCATTCTTGCAAAGATTCATGGCCCCATAATGACTTTGAAGTTGGGACAATTAACCACCATAGTGATCTCTTCAGCTGAAATGGCCAAAATGGTGCTYCAAACCTATGATCAGTTCTTATCGAATCGCACMGTTCCGGAGGCRGCAAGARTTCACAATCACCATATTCATAGCATTGCCTTCATGCCTATGACACCTCTTTGGAGATCCCTTAGGAAGATATGCAACAATCAGTTATTCGCCAACAAGACTATTGACGCGAGGCAAGACTTGCGTCGCAAGAAAGTGCAAGAACTCCTTGGGGAGATCCATCAAAGTAGCCAAATTGGSGAAGGAGTGGATGTTGGAGAAGCAGCTTTCAAGACTACAATAAATTTATTGTCCAACACAATTTTTTCAATGGATTTGGTTCAATCTTCAGGTTCTGCTGCACGGTTCAAGGATTTAGTTGCCAATATCACCAAAGAGAGTGGAAAACCAAACTTGGCTGATTATTTTCCAGCCTTGAGAATGGTTGATCCACAAAGAATTAAAGCACACAATRCCATTTATGCTGGGAAGTTATTGGATATCTTCCATGACTTGATTTACCAAAGGAAGAAGTTGATACTGAAAACAGGTTCTGACACCAATAAGGACATGTTAGAAGCTCTTCTTAACATTTCTCAAGAGAATAGCAAAGAGATGGACAAAATAAATATTGAACATTTAATGCTGACCTTATTTGTTGCTGGAACAGATACAATCACATCTACATTAGAATGGGCAATGACTGAATTACTCAGCAATCCARACACTATGAWAAAGGCTAAAAGGGAGCTTGAAGAAACAATTGGAAAGGGAAACCAAGTTGAGGAATCAGACATAGCAAGATTACCATATTTACAAGCAATATTGAAAGAGACATTTCGTTTGCACCCTTCAGTGCCTTTTTTGATCCCAAGAAAAGCTGACACTGATGTAGAAATCAATGGCTATACCATACCAAAAGGTTCACAAGTGCTAATCAATGTTTATGCTATTGGAAGGGATTCAAATGTATGGAAGAATGACACAAATTTGTTCTCACCAGAGAGGTTCTTGGGATTAGAAACTGATGTTAGAGGGAGGCATTTTGAGTTGATACCATTTGGTGCTGGTAGAAGAATATGTCCTGGTTTAACATATGCTATGAGGATTTTGTTCTTGATGTTAGGTTCACTGGTTAATTGTTTTGATTGGAAGCTTGAAAATGATTCAAAAGCTGAGGATATTGATAAGGAAGAAGAATTTGGAATAACATTAAGAAAGTGTAAACCCCTTAGATCCATTCCAATCAAAGTAAATAACTAA 1512 0.3823 MDLVSFVMLLLLLLTCTTLYSLHHLNVRRSKANYKLPPGPSPLPIIGNLHELGNKPHHSSAILAKIHGPIMTLKLGQLTTIVISSAEMAKMVLQTYDQFLSNRTVPEAARXHNHHIHSIAFMPMTPLWRSLRKICNNQLFANKTIDARQDLRRKKVQELLGEIHQSSQIGEGVDVGEAAFKTTINLLSNTIFSMDLVQSSGSAARFKDLVANITKESGKPNLADYFPALRMVDPQRIKAHNXIYAGKLLDIFHDLIYQRKKLILKTGSDTNKDMLEALLNISQENSKEMDKINIEHLMLTLFVAGTDTITSTLEWAMTELLSNPXTMXKAKRELEETIGKGNQVEESDIARLPYLQAILKETFRLHPSVPFLIPRKADTDVEINGYTIPKGSQVLINVYAIGRDSNVWKNDTNLFSPERFLGLETDVRGRHFELIPFGAGRRICPGLTYAMRILFLMLGSLVNCFDWKLENDSKAEDIDKEEEFGITLRKCKPLRSIPIKVNN* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1148 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Amo13g1148 503 PANTHER CYTOCHROME P450 FAMILY PROTEIN 6 502 - -
Amo13g1148 503 Pfam Cytochrome P450 37 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1148 503 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1148 503 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1148 503 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1148 503 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1148 503 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1148 503 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1148 503 SUPERFAMILY Cytochrome P450 30 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1148 503 Gene3D Cytochrome P450 23 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1148 503 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 6 502 - -
Amo13g1148 503 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1148 503 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1148 503 PRINTS P450 superfamily signature 444 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g1148 503 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1148 Amo-Chr13 14929392 14931040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1148 1 500 Cytochrome P450 AT2G45550 45.365 2.20e-155 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1148 - K23810 gmx:100805772 605.52