Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1143 ATGATAAACGTGCTCCTCAAAACATCTGAAGGCAAAACCAAGAACGGAATAGACAAAGAAGCTCTTCGCCAGATCAGAGATGCCGCTCATGAGGCTGAGGATGTCATCGACACCTTTGTTGTCAACGTGGCTATGCACAAGCGTCGAACCAAGCTGGGGAGGATGCTCCATGGTTTTGAACATGCAAAGTTGCTCCGGGATGTGGCTGAGAAAATAGACAGCATCGAAGCCACTATCAATAAAATAAGAGACAACAAGATCAAGCTCACCGATGTCGTCCCACAAGAAAGTGAATCATCGACGTCAACAAGAGAAGAGGAGGAGAGGATTCTGTTGATGCACAAGAAGAGAAGAATTGTGGAAGAACATGGTATAGTTGGTTTTGTTGGTGAATCGAAGGCAGTGATCCAGCTGCTTAAGGAAGAGAGTTCCCAAAGCAACGTTGTGTCCATCATCGGTATGGGTGGGTTGGGCAAAACCACCCTTGCTCGAAAGGTCTATAACACGGATGAGGTGATGTCATATTTCCATTGTCGTGCATGGGTTTATGTTTCAAATGATTGCAGAGTTATGGAGCTTTTGATTGGCCTTATCAAGTCTTTGATGCCTGATGAGATGAAGCGAATTGACCTCTTTAGCTTGAGTGTGGATGAACTAAAGCTCAAGGTGCAAGATTTCTTGTCCATGAAAAGGTATCTGATAGTCCTTGATGACCTCTGGAATACTCGAGATTGGGATGAGATACAAGATGTTTTTCCAAACGACAATAACGGTAGTAAAATACTCATTACTAGCCGTTTGAAAGAGGTGGCATCCCATACGAGTCCATATCCTCCTTATTACCTTCAGTTCCTCGGTGATGTTGAAAGTTGGGAACTCTTTTCCAGGAGAGTGTTTCGAGGAGAAGAGTGTCCTTCTGATATAGAGCAACTTGGAAAACAGATGGTCAAAAGTTGTGGCGGTTTGCCACTCTCCATTGTTGTTTTGGCAGGGTTACTTGCAAAGAAGGGGAAGTCACACAAGGAATGGTCCAAAGTTGAGGGACATGTTAACTGGTTTCTTACTCAAGAAGATAAGACCCAAGTCAAGGACATTGTACTCAAACTCAGCTACGACAACTTGCCTACAAAACTAAAGCCGTGCTTTCTGTATTTCGGGATCTACCCTGAAGATTTTGAGATACGTGTAAGGCCATTGCTGCAAAAATGGGTTGCTGAGGGATTTATTCAACAAACTGGGACCAGAAATGCAGAGGATGTTGCTGAAGACTACTTGTATGAGCTCATTGATCGTAGCTTGGTTCAAGCATCGCGAGTGGACTTTAATGGAGATGTGAAGGCATGTCGCATCCATGATCTTCTTCGAGATCTTTGCATCTCTGAGGGCAAAGAGCACAAGATTTTTGAAGTTTGCTCAGATGTTAACACTTTGGATAGATCAAAACCACGCAGGCTCTCTATCCAATGCCCCATGCATCGCTATGCTTCTTCAAGCAATGATGACCATTCATGTGTCCGCTCTTTGTTTCACTTTGGCCCAAGAGGGTATTGTGATTTTACCCCCGGTGAGCAGAAATGGCTCTTCAAATCGTTCAAACTGGTTCGGGTATTAGATCTTGGGTACAACTATTTCAGCAAAGTCCCTTCCAACTTGGGCTTATTTATCCATTTAAGGTATCTAAGAATATACATAATGACAGCAATAAGTCCTCAACACATTGCAGATTCTATATGTAAACTTGAAAACTTACAAACTTTGGACATAGGTGGGGTGCCGATTCCAATAGTATTTCCTAAGGGAGTATGGAACCTTAAACAACTTAGGCATTTGAATACAGCAGGATGGGTCCTCCTAGAAGACCACTATGGTTCAAAAGCACATGATCAAGTTATGTTGAATCTTCAAACCATCTCTTTCATTGCATTCACTGAACAGATTGCAGACATGTTAAAGAAAGGAAGGTTTCCCAATCTACGAAAGTTGGGTTTGAACATCTTGCCGTTCCTCAGAGACGACATGCATGAGATGTTATCAAGCCTACAACAATTAACTCATCTGAACAAGTTACGACTCTTCTTTGACAGGGAACGGCAGATCGGTTGCAAGCCAATTGATTTGTCACAGAGCCTGCAGCACTTGTCGAATCTGAGCACTTTAAAAGTTGATGAAGCTTTTAACCTTGCAACGTTTGATATTGCATTTCCACCATGCATTACAAAATTAACGTTGACAGGCATTAGCATCAGGAATGATGATGGGATGAATGCCATTGGTAATCTTACTACACTCCGACTTTTGAGATTGTATGGAACAGGTAAATTTGATGATTCCTTTGAGATTAATTGCACTGCAAACAGTTTCCCACAGCTCCAGGTTTTTGAGATGGAGAAGCTGAATGTTGACAACTGGAAATTAGGCAATGGTGCAATGCCATGCCTTCAAACTCTGCTTATCAAATGCTGTGAAAGATTGGACGATCTCCCAGACGAACTGTGGTCTTTGACTTCCCTGAGACAAGTAAAAGTTGTGGAACCCTCCCAAGCATTGTCTCTTGCCGTAGCAAATTTGGAAATGAAGGATGGATGTGAGCTCATAATAACAGAGGGAGATTGA 2613 0.4263 MINVLLKTSEGKTKNGIDKEALRQIRDAAHEAEDVIDTFVVNVAMHKRRTKLGRMLHGFEHAKLLRDVAEKIDSIEATINKIRDNKIKLTDVVPQESESSTSTREEEERILLMHKKRRIVEEHGIVGFVGESKAVIQLLKEESSQSNVVSIIGMGGLGKTTLARKVYNTDEVMSYFHCRAWVYVSNDCRVMELLIGLIKSLMPDEMKRIDLFSLSVDELKLKVQDFLSMKRYLIVLDDLWNTRDWDEIQDVFPNDNNGSKILITSRLKEVASHTSPYPPYYLQFLGDVESWELFSRRVFRGEECPSDIEQLGKQMVKSCGGLPLSIVVLAGLLAKKGKSHKEWSKVEGHVNWFLTQEDKTQVKDIVLKLSYDNLPTKLKPCFLYFGIYPEDFEIRVRPLLQKWVAEGFIQQTGTRNAEDVAEDYLYELIDRSLVQASRVDFNGDVKACRIHDLLRDLCISEGKEHKIFEVCSDVNTLDRSKPRRLSIQCPMHRYASSSNDDHSCVRSLFHFGPRGYCDFTPGEQKWLFKSFKLVRVLDLGYNYFSKVPSNLGLFIHLRYLRIYIMTAISPQHIADSICKLENLQTLDIGGVPIPIVFPKGVWNLKQLRHLNTAGWVLLEDHYGSKAHDQVMLNLQTISFIAFTEQIADMLKKGRFPNLRKLGLNILPFLRDDMHEMLSSLQQLTHLNKLRLFFDRERQIGCKPIDLSQSLQHLSNLSTLKVDEAFNLATFDIAFPPCITKLTLTGISIRNDDGMNAIGNLTTLRLLRLYGTGKFDDSFEINCTANSFPQLQVFEMEKLNVDNWKLGNGAMPCLQTLLIKCCERLDDLPDELWSLTSLRQVKVVEPSQALSLAVANLEMKDGCELIITEGD* 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1143 870 Coils Coil 65 85 - -
Amo13g1143 870 Pfam NB-ARC domain 134 373 IPR002182 GO:0043531
Amo13g1143 870 CDD RX-CC_like 23 84 IPR038005 -
Amo13g1143 870 Gene3D - 285 370 IPR042197 -
Amo13g1143 870 PRINTS Disease resistance protein signature 148 163 - -
Amo13g1143 870 PRINTS Disease resistance protein signature 226 240 - -
Amo13g1143 870 PRINTS Disease resistance protein signature 711 727 - -
Amo13g1143 870 PRINTS Disease resistance protein signature 319 333 - -
Amo13g1143 870 PANTHER DISEASE RESISTANCE PROTEIN RP 12 865 IPR044974 GO:0006952
Amo13g1143 870 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 117 385 IPR027417 -
Amo13g1143 870 PANTHER - 12 865 - -
Amo13g1143 870 Gene3D Ribonuclease Inhibitor 516 858 IPR032675 -
Amo13g1143 870 Gene3D - 371 461 IPR036388 -
Amo13g1143 870 Gene3D - 105 276 IPR027417 -
Amo13g1143 870 SUPERFAMILY L domain-like 449 841 - -
Amo13g1143 870 Gene3D - 1 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1143 Amo-Chr13 14818706 14822459 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1143 149 457 WRKY Transcription Factor Family AT5G45050 25.080 6.12e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1143 - - adu:107477359 1226.85