Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1138 ATGGCAGATACTGTGATTTCCTTTGTCCTTGATAACTTGTCCCAATTGCTAGCACGCGAAGCCAGTCTGCTGTGTGGTGTGGATGACAAGGTTAGATCCCTTCACAGTGAGCTCAGCATGATAAACGTGCTCCTCCAAACATCTGAAGGCAAAACCAAGAACGGAATAGACAAAGAAGCTCTTCGCCAGATCAGAGATGCCGCTCATGAGGCTGAGGATGTCATCGACACCTTTGTTGTCAAAGTAGCTATGCACAAGCGTCGAACCAAGCTGGGGAGGATGCTCCATGGTTTTGAACATGCAAAGTTGCTCCGGGATGTGTCTGCGAAAATAGACAGCATCGAAGCCACTATCAATAAAATAAGAGACAACAAGATCAAGCTCACCGATGTCGTCCCACAAGAATGTGAATCATCGACGTCAACAAGAGAAGAGGAGGAGAGGATTCTGTTGATGCACAAGAAGAGAAGAATTGTGGAAGAACATGGTGTAGTTGGTTTTGTTGGTGAATCGAAGGCAGTGATCCAGCTGCTTAAGGAAGAGAGTTCCCAAAGCAACGTTGTGTCCATCATCGGTATGGGTGGGTTGGGCAAAACCACCCTTGCTCGAAAGGTCTATAACACGGATGAGGTGATGTCATATTTTCATTGTCGTGCATGGGTTTATGTTTCAAATGATTGCAGAGTTATGGAGCTTTTGATTGGCCTTATCAAGTCTTTGATGCCTGATGAGATGAAGGGAATTGACCTCTTTAGCTTGAGTGTGGATGAACTAAATCTCAAGGTGCAAGATTTCTTGACCATGAAAAGGTATCTGATAGTCCTTGATGACCTCTGGAATACTCGAGATTGGGATGAGATACAAGATGTTTTTCCAAACGACAATAACGGTAGTAAAATACTCATTACTAGCCGTTTGAAAGAGGTGGCATCCCATACGAGTCCATATCCTCCTTATTACCTTCAGTTCCTCGGTGATGTTGAAAGTTGGGAACTCTTTTCCAGGAGAGTGTTTCGAGGAGAAGAGTGTCCTTCTGATATAGAGCAACTTGGAAAACAGATGGTCAAAAGTTGTGGCGGTTTGCCACTCTCTATTATTGTTTTGGCAGGGTTACTTGCAAAGAAGGGGAAGTCACACAAGGAATGGTCCAAAGTTGAGGGACATGTCAACTGGTTTCTTACTCAAGAAGATAAGACCCAAGTCAAGGACATTGTACTCAAACTCAGCTACGACAACTTGCCTACAAAACTAAAGCCGTGCTTTCTGTATTTCGGGATCTACCCTGAAGATTTTAAGATACGTGTAAGGCCATTGCTGCAAAAATGGGTTGCTGAGGGATTTATTCAACAAACTGGGACCAGAAATGCAGAGGATGTTGCTGAAGACTACTTGTATGAGCTCATTGATCGTAGCTTGGTTCAAGCATCGCGAGTGGACTTTAATGGAGATGTGAAGGCATGTCGCATCCATGATCTTCTTCGAGATCTTTGCATCTCTGAGGGCAAAGAGCACAAGATTTTTGAAGTTTGCTCAGATGTTAACACTTTGGACAGATCAAAACCACGCAGGCTCTCTATCCAATGCCCCATGCATCGCTATGCTTCTTCAAGCAATGATGACCATTCATGTGTCCGCTCTTTGTTTCACTTTGACCCAAGAGGGTATTGTGATTTTACCCCCGGTGAGCGGAAATGGCTCTTGAAATCGTTCAAACTGGTTCGGGTATTAGATCTTGGGAACAACTTTTTCAGTAAAGTCCCTTCCAACTTGGGCTTATTTATCCATTTAAGGTATCTAAGAATAGAGACAGTGATAGTAATAAGTCCTCAACACATTCCAGATTCTATATGTACACTTGAAAACTTACAAACTTTGGACATAGATGGGGTGCCGATTCCAATATTATTTCCTAAGGGAGTATGGAACCTTAAACAACTTAGGCATTTGAATACAAAAGGATGCGTCGTCCTACAAGACCACCATGGTTCAAAAGCAGATGATCAAGTTATGTTGAATCTTCAAACCATCTCTTTCCTTGCATTCACTACAGAGATTGCAGGCATGTTAGAGAAAGGAAGGTTTCCCAATCTACGAAAGTTGGGTTTGAACATCTTGCCGTTCCTCAGAGACCACGTGCATGAGATGTTGTCAAGCCTACAACAATTAACTCATCTGAACAAGTTACGACTCTTCTTTGACATGAAATGGCAGATCGGTTGCAAGCCAATTGATTTGTCACAGAGCTTGCAGCAGTTGTCAAATCTGACCACATTAAAAGTTAATAAAGCTTTTAACCTTGCAACGTTTGATATTGCATTTCCACCATGCATTACAAAATTAACGTTGACAGGCATTAGCGTCATGAATGATGATGGGATGAATGCCATTGGTAATCTTACTAGACTCAGACTTTTGAGATTGTTCGGAACATATGAATTTGATATTTCCTTTGATATCAATTGCACTGCAAGCAGTTTCCCACAGCTCCAGATTTTTGAGATGGGGAACCTGAAAGTTGACAACTGGAAATTAGGCAATGGTGCAATGCCATGCCTTCAAACTCTGCTTATCAGAGACTGTGAAAGATTGGACGATCTCCCAGATGAACTGTGGTCTTTGACTTCCCTGAGACAAGTACAAGTTGTGAGACCCTCCGAAGCATTGTCTGATGCGCTAGCAAATTTGGAAATGAAGGATGGATGTGAGCTCATAATAACAGAGTGGTAA 2727 0.4261 MADTVISFVLDNLSQLLAREASLLCGVDDKVRSLHSELSMINVLLQTSEGKTKNGIDKEALRQIRDAAHEAEDVIDTFVVKVAMHKRRTKLGRMLHGFEHAKLLRDVSAKIDSIEATINKIRDNKIKLTDVVPQECESSTSTREEEERILLMHKKRRIVEEHGVVGFVGESKAVIQLLKEESSQSNVVSIIGMGGLGKTTLARKVYNTDEVMSYFHCRAWVYVSNDCRVMELLIGLIKSLMPDEMKGIDLFSLSVDELNLKVQDFLTMKRYLIVLDDLWNTRDWDEIQDVFPNDNNGSKILITSRLKEVASHTSPYPPYYLQFLGDVESWELFSRRVFRGEECPSDIEQLGKQMVKSCGGLPLSIIVLAGLLAKKGKSHKEWSKVEGHVNWFLTQEDKTQVKDIVLKLSYDNLPTKLKPCFLYFGIYPEDFKIRVRPLLQKWVAEGFIQQTGTRNAEDVAEDYLYELIDRSLVQASRVDFNGDVKACRIHDLLRDLCISEGKEHKIFEVCSDVNTLDRSKPRRLSIQCPMHRYASSSNDDHSCVRSLFHFDPRGYCDFTPGERKWLLKSFKLVRVLDLGNNFFSKVPSNLGLFIHLRYLRIETVIVISPQHIPDSICTLENLQTLDIDGVPIPILFPKGVWNLKQLRHLNTKGCVVLQDHHGSKADDQVMLNLQTISFLAFTTEIAGMLEKGRFPNLRKLGLNILPFLRDHVHEMLSSLQQLTHLNKLRLFFDMKWQIGCKPIDLSQSLQQLSNLTTLKVNKAFNLATFDIAFPPCITKLTLTGISVMNDDGMNAIGNLTRLRLLRLFGTYEFDISFDINCTASSFPQLQIFEMGNLKVDNWKLGNGAMPCLQTLLIRDCERLDDLPDELWSLTSLRQVQVVRPSEALSDALANLEMKDGCELIITEW* 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1138 908 Gene3D - 324 409 IPR042197 -
Amo13g1138 908 PANTHER - 50 905 - -
Amo13g1138 908 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 424 IPR027417 -
Amo13g1138 908 PANTHER DISEASE RESISTANCE PROTEIN RP 50 905 IPR044974 GO:0006952
Amo13g1138 908 Gene3D Ribonuclease Inhibitor 519 900 IPR032675 -
Amo13g1138 908 SUPERFAMILY L domain-like 488 880 - -
Amo13g1138 908 PRINTS Disease resistance protein signature 187 202 - -
Amo13g1138 908 PRINTS Disease resistance protein signature 265 279 - -
Amo13g1138 908 PRINTS Disease resistance protein signature 358 372 - -
Amo13g1138 908 PRINTS Disease resistance protein signature 750 766 - -
Amo13g1138 908 Gene3D - 5 106 - -
Amo13g1138 908 Gene3D - 410 500 IPR036388 -
Amo13g1138 908 Pfam NB-ARC domain 173 412 IPR002182 GO:0043531
Amo13g1138 908 Gene3D - 146 315 IPR027417 -
Amo13g1138 908 Coils Coil 104 124 - -
Amo13g1138 908 CDD RX-CC_like 2 123 IPR038005 -
Amo13g1138 908 Pfam Rx N-terminal domain 5 90 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1138 Amo-Chr13 14364385 14367438 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1138 188 496 WRKY Transcription Factor Family AT5G45050 24.595 3.12e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1138 - - adu:107477359 1280