Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1122 ATGGAAACGAGTCCCGGCCGTACAATTAAGCTCCTCTGCAGCTACGGCGGCAAGATCATCCTCCCACGCGCTACCGACGGCGAGCTCCGTTACATCGGTGACCACACCAAAGTCCTCACCGTGGATCTGTTCCTCGTTTTTTTCTGTGATTGTTCGTTAACTGTTTCTGTTTCGCGATGTGCAAACTTGTTGGTAAAACTAGGAGAGTTATGCGGTTCGTCTGTAACGTTACGGTGTCAATTGCCGAACGAAGACTTAGAAACATTGATCTCCGTCACCAACGACGAAGATCTGACGCACATAATCGAAGAATATGACCGTGCTTTGTCGAAATTACCTCATCCGTTGAAGATCAGAGCCGTGCTGTTTCGGCCAAAATCGTCGAAGAAGGTTTCTCCGGCAACGTCGTCTCCGTTGAAGAAGTTGAAGATGACACTTAACATAATAGGAGATATTTAA 459 0.4728 METSPGRTIKLLCSYGGKIILPRATDGELRYIGDHTKVLTVDLFLVFFCDCSLTVSVSRCANLLVKLGELCGSSVTLRCQLPNEDLETLISVTNDEDLTHIIEEYDRALSKLPHPLKIRAVLFRPKSSKKVSPATSSPLKKLKMTLNIIGDI* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1122 152 Gene3D - 52 122 - -
Amo13g1122 152 Pfam PB1 domain 58 112 IPR000270 GO:0005515
Amo13g1122 152 PANTHER PB1 DOMAIN PROTEIN 7 139 - -
Amo13g1122 152 PANTHER OS05G0427100 PROTEIN-RELATED 7 139 - -
Amo13g1122 152 SMART PB1_new 24 123 IPR000270 GO:0005515
Amo13g1122 152 SUPERFAMILY CAD & PB1 domains 27 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1122 Amo-Chr13 14215008 14215521 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1122 9 133 MAP Kinase Kinase Kinase AT1G04700 40.000 6.74e-19 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1122 - - ahf:112772317 273.863