Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1121 CAGAAAGTTGTTCCTTTTGAAAATCCAGGACTGATGGCAAGTTCTACTGTTCAGACCGACAAGGTTACCACTTTGGATAGCAACAAGTCTTCAAAGTCTAATTTTCTTTCTTTCATTGGAGCACATGAGATTTTCATGCCACTGACATGGGTGGCAGCGCTGAGAGAGCTAGTTCTCAACTGCATGTTAATGTTTATGCAAACAGGCTCAATATTGGGCTGCTTGGACTCAAATGAAGTTGATCCCAAACTGTTAGTCCCTGTTGTAATATTCATTCTATTATTTTTGCTCTTAATAAACACAATTCCATTCTCCGAATTTCACATGAGTTCCACTGTCACAGTAATAGCAACGTTAAAGAATGTTATTACTATAACACGTGGACTAATGTATATCATTGCACAGTGTATTGGTTCAATAACTGGTTTCATTATACTAAAATATGTAATGAATCCAAAATTACAAGAAAAATATTCATTTAAAAGCTGTGCAATTGGTGATGATCATAATATAAAACTAGGATCAAAGCCACTAGTTGCATTTTTTATAGAATTTTCATTCACATCTTTGGTGCTGTTTACTTTGGGATTTGACAAGAAAAAGTTAGAGAAATTAGGATTACCAAGGGTGTCTGCTGTGACTGCTGGAGCATTGGCATTGACAACATTTGCCTCTATAATTGTTACTGGATACCTAGGCAATGCTGGTGTTGGGTTTAATCCAACAAGGTGTTTGGGCCCCTTTGCTAAGAAATGGATTATTGGCGAATGA 771 0.3658 QKVVPFENPGLMASSTVQTDKVTTLDSNKSSKSNFLSFIGAHEIFMPLTWVAALRELVLNCMLMFMQTGSILGCLDSNEVDPKLLVPVVIFILLFLLLINTIPFSEFHMSSTVTVIATLKNVITITRGLMYIIAQCIGSITGFIILKYVMNPKLQEKYSFKSCAIGDDHNIKLGSKPLVAFFIEFSFTSLVLFTLGFDKKKLEKLGLPRVSAVTAGALALTTFASIIVTGYLGNAGVGFNPTRCLGPFAKKWIIGE* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1121 256 PRINTS Major intrinsic protein family signature 90 114 IPR000425 GO:0015267|GO:0016020|GO:0055085
Amo13g1121 256 PRINTS Major intrinsic protein family signature 127 146 IPR000425 GO:0015267|GO:0016020|GO:0055085
Amo13g1121 256 PRINTS Major intrinsic protein family signature 221 243 IPR000425 GO:0015267|GO:0016020|GO:0055085
Amo13g1121 256 PRINTS Major intrinsic protein family signature 51 70 IPR000425 GO:0015267|GO:0016020|GO:0055085
Amo13g1121 256 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 18 247 - -
Amo13g1121 256 Gene3D Glycerol uptake facilitator protein. 37 253 IPR023271 -
Amo13g1121 256 SUPERFAMILY Aquaporin-like 42 248 IPR023271 -
Amo13g1121 256 Pfam Major intrinsic protein 54 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Amo13g1121 256 PANTHER AQUAPORIN-LIKE 18 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1121 Amo-Chr13 14204000 14210898 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1121 93 246 Major Intrinsic Protein MIP AT3G54820 25.000 3.50e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1121 K09866 - ahf:112789224 449.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1121 13 14204000 14210898 Amo13g1121 13 14204000 14210898 ECH