Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1109 ATGCTGATGTTCGCCGGAACAGCGGCGGCCATAACCAACGAAAAGACCAATGGATTGGAAAGTCTATTGGGCTGCGCTGTCGTCACCGGCCTTGCGGTGACGGTGATCATCCTGTGCACCGGACACATATCCGGTGCTCATCTGAACCCCGCTGTCACCATAGCATTTGTCACCATATCACGAGTTCTTACATTCTTTCATGGGAAATATATAAAGAACTTGACATTTAAAATTATTCTATCTTATATTTAA 252 0.4524 MLMFAGTAAAITNEKTNGLESLLGCAVVTGLAVTVIILCTGHISGAHLNPAVTIAFVTISRVLTFFHGKYIKNLTFKIILSYI* 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1109 83 Pfam Major intrinsic protein 2 62 IPR000425 GO:0015267|GO:0016020|GO:0055085
Amo13g1109 83 PANTHER AQUAPORIN NIP2-1 1 61 IPR034294 -
Amo13g1109 83 ProSitePatterns MIP family signature. 47 55 IPR022357 -
Amo13g1109 83 PANTHER BNAA02G36290D PROTEIN 1 61 - -
Amo13g1109 83 SUPERFAMILY Aquaporin-like 1 62 IPR023271 -
Amo13g1109 83 Gene3D Glycerol uptake facilitator protein. 1 79 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1109 Amo-Chr13 14008652 14009401 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1109 1 72 Major Intrinsic Protein MIP AT1G80760 59.722 3.94e-22 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1109 K09874 - adu:107477236 138.658