Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1090 ATGGAAAATCGAGCTTCAACTTCTGGGACCATGTTTACTAACTACGATATCTTTCTGAGTTTCAGGGGTGAAGACACACGTCATGGATTCACAGGTCATCTCTATGATGCTCTCTGCCGCAACGGAATCAACACCTTCATCGATGATGAGAATCTCAGAACAGGAGAAACAATTCGACCTCAACTCCTTCAATCCATTGAAGCCTCAAAGATCTCCATTATTGTTTTCTCAACAAACTATGCAGCTTCAACATGGTGCCTTGATGAACTCGTTAAGATCCTGCAATGTCACAGGGAAAGGAACCAACTTGTGTTTCCGGTCTTCTACAAAGTAGAGCCCTCAGATGTACGGCATCAGAGGAACACTTACAAGGAAGCCATGGATGCTCATGAAATCAGGTTTGGTTGTCACACTCAGAAGGTGAAAGAATGGAAGGAAGCTTTGGCAGAAACATCCAACATGAAAGGCTTTCATTTGAAACAAGGGTATGAATTCAAGTTTATTCAAGAAATTGTAAGCAAGGCATTGACTCATATACCTCCAAGACAATTACTTATTGAGGATCGTATGATTGGATTGCAAACTCGAGTTGTAGAAGTGGAGTCACATCTATATTCATCGTACAGCACATCTAAGTACAAGATATTATCCAATATCAAATCACCCAAACCAAAGCTCTACAATAACAATACCATGTTGGGGATTGTTGGAATTGGTGGGAGTGGAAAGACGACACTTGCCAAAGCCTTGTATAACTCCATCTGTGGCCGGTTTGAATGTGCTTGTTTTCTTTTCAATGTTAGAAAAATTTCAGATCAAGAAGAGGGCCTAGTACGTCTACAGCAAACGCTCCTCTCAAAGTTGCTTGGGGAGGGGGAAATCAAGGTCCGCAGTGTCGAGGAAGGAATCAGTATGATCAAAGAGAAACTTAGCAAAAAAAGAGCTCTTATTGTTCTTGATGATGTTGATAAGATAGAACAATTAAAAGCATTTGCAGGAGAATGTGATTGGTTTAGTGACGAGACTCGAATTGTTATGACAACAAGGGATAAATATCTTCTAACAGCTCATAAAGTCGAAAAGATTTACAAGATGAAATTGCTAAGTGACCCTGAATCTCTAGAGCTCTTCTGTTGGAATGCCTTCAAAATGACAAGGCCCGAAGCAAACTATGAAGGCCTATCCAATCAAGCAATACATTATGCCCAGGGTCTCCCATTAGCCTTAAAGGTTATAGGCTCTAATTTGATTAATAAAAATTTAAAAGAGTGGAAGTCTGCTTTGGACAAATATGAGAAGAATCCTCCTAAAGACATTCAAAGTGTTCTTAGAGTAAGCTATGATAGTCTTGAAGGCAATGAAAAGGATATTTTTCTTGACATAGCATGCTTCTTCAATGGGAAGAAATGTGAATATGTAAAAAATGTATTAGATGGATGTGGTATGTTTACAGAAGATGGTATTAGAGTACTAGTTGATAAATCTCTCTTAACTATCAACGATGGTTACTTGAGGATGCATGATCTAATACAGAATATGGGTAGAGAGATTGTGAAGCAGGAGGCACCAAAAGACGTTAGTAAACGCAGCAGATTATGGTTTCATGAAGATGTTCTTAAGCTACTAACCGAAGATAAACTTGTTCAATGTGAAGAAGATGATTGGACTGATACTGCCTTTGTGAAGATGAAGCAACTTAGAATTCTCATTCTTCGGAACACAAACCTTTCATGTGGGACTATTCATCTACCTAAGCAATTAAGGCTACTTGATTGGAGGGGGTACCCTTCAAATTCTATCCCATCGGACTTAAAAGAAATTGTTGCCTTCAGTTTGCGTCATAGTCCTCTGACGTTGGAAAAGCCGTTTCAGAACTTTGGGCATTTGACTTACATGAATTTCTCCCATTGTGAATCGATCACTCATTTTCCTAATGTATCTGAAGCCCAATGTTTAAGAAAGTTGATACTCAATGGATGCATAAACTTGGTTAGGTTTGATGAATCAGTTGGATTTCTCCCAAACCTTACATATTTGAGAGCTTCAAAGTGCATTAAGTTAACAAAGTTTCTTTCAAGAATTTGTTTGCCTTCACTAGAGCACCTTTCCTTTAACTGGTGTAGAAGACTTGGACTCTTCCCAGACATAGTGGGAAAGATGGATAAGCCATTAAAGATTTGTTTGAAAGCTACTGCTATTCAAGAGCTTCCAGATTCCTTTGTTGATCTTGTAGGACTTCACTATTTAGATTTGACAAGTTGCGAGAAACTTGGTTATCTTCCAAGCTGCTTATTTATGCTGCCAAATTTTGTCACATTGAAAGTTGGAGGATGCCCTCAACTTGGTGGATCGTTTGCAAGATTCAGAGAAAGCCTTTCAACTAATGCAGAGTGCCGTCCAAGTTTAGAAACTCTACATTTCAGCCATGCAAGTTTATGTGACGAAGATCTTCATGTAATTATGCTGAGTTTTCCAAACTTGGAAGTCTTAAATGTTTCATTAAACAACTTCGTGTCTATTCCAGCATGCGTTCAAGAATTGTCCTACTTGACAAGTTTGGATTTGAGTTATTGCCTAAATCTTCAAGAAATTCCAAAACTTCCCTCTAGTGTTAGGAAAGTGGATCTGAGACACTGCAATTCCTTAAGTGCAAGCACCACAAGTATGCTATGGTCACAGGTGCGCGAAGAGATACATAAATTACAAGTTGTGATGCCAACTTCCAATACAAAGATTCCAAAATGGTGGGACGATCGTACAAGTTGGAAGCACGATCCACAGGACCTGAATTTCTGGGCACGTGGCAAGTTCCCAGTTGTGGCTTTGGCGTTTGTGTTTGGAGAAATGAACTATCAATCTGTTGGGCTGGACTTGTCCATTGACTCTGGGGATGTAAACTCTACATACCAACCATCGCATAATTTCAGAGTTGCAGAAAATCATGTGTTGTTGTGCGACCTACGACTATGGTTCAGTGATGAGGAGTGGAAGAGACTTGATGCACATGTTGAGCATGGTAACAAATGGAAGACAGTGAAGGTGAGGTGTGTACCAGACATCATCCCAGTTCATTGGGGAGTGTATGTTTACAAGGAAGAAACAAGCATGAAAGATGTCCAATTTCAGGAGTGGGAGGCGGTTAACTTGAGTTGGACAGAGCCTTCTGTGAAGAAGAGATTATATTCTGCTGAGGAACTTTACATTGCTAGCTTCTCAGAAAGCCTCAAAACTGTGGTAAAAAATTTGAAGCGGCTTATGGCTCCAAGAGAAGAGCAAAGCTTTTGCTTAATGCAACATGACAGAGATAAGGACAAAGATGAGGATGAGGATGAGGATGAGGATGAGGAAGGAGAGTCAGACATGGAAGCATAG 3372 0.3986 MENRASTSGTMFTNYDIFLSFRGEDTRHGFTGHLYDALCRNGINTFIDDENLRTGETIRPQLLQSIEASKISIIVFSTNYAASTWCLDELVKILQCHRERNQLVFPVFYKVEPSDVRHQRNTYKEAMDAHEIRFGCHTQKVKEWKEALAETSNMKGFHLKQGYEFKFIQEIVSKALTHIPPRQLLIEDRMIGLQTRVVEVESHLYSSYSTSKYKILSNIKSPKPKLYNNNTMLGIVGIGGSGKTTLAKALYNSICGRFECACFLFNVRKISDQEEGLVRLQQTLLSKLLGEGEIKVRSVEEGISMIKEKLSKKRALIVLDDVDKIEQLKAFAGECDWFSDETRIVMTTRDKYLLTAHKVEKIYKMKLLSDPESLELFCWNAFKMTRPEANYEGLSNQAIHYAQGLPLALKVIGSNLINKNLKEWKSALDKYEKNPPKDIQSVLRVSYDSLEGNEKDIFLDIACFFNGKKCEYVKNVLDGCGMFTEDGIRVLVDKSLLTINDGYLRMHDLIQNMGREIVKQEAPKDVSKRSRLWFHEDVLKLLTEDKLVQCEEDDWTDTAFVKMKQLRILILRNTNLSCGTIHLPKQLRLLDWRGYPSNSIPSDLKEIVAFSLRHSPLTLEKPFQNFGHLTYMNFSHCESITHFPNVSEAQCLRKLILNGCINLVRFDESVGFLPNLTYLRASKCIKLTKFLSRICLPSLEHLSFNWCRRLGLFPDIVGKMDKPLKICLKATAIQELPDSFVDLVGLHYLDLTSCEKLGYLPSCLFMLPNFVTLKVGGCPQLGGSFARFRESLSTNAECRPSLETLHFSHASLCDEDLHVIMLSFPNLEVLNVSLNNFVSIPACVQELSYLTSLDLSYCLNLQEIPKLPSSVRKVDLRHCNSLSASTTSMLWSQVREEIHKLQVVMPTSNTKIPKWWDDRTSWKHDPQDLNFWARGKFPVVALAFVFGEMNYQSVGLDLSIDSGDVNSTYQPSHNFRVAENHVLLCDLRLWFSDEEWKRLDAHVEHGNKWKTVKVRCVPDIIPVHWGVYVYKEETSMKDVQFQEWEAVNLSWTEPSVKKRLYSAEELYIASFSESLKTVVKNLKRLMAPREEQSFCLMQHDRDKDKDEDEDEDEDEEGESDMEA* 1124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1090 1123 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 10 903 - -
Amo13g1090 1123 MobiDBLite consensus disorder prediction 1105 1123 - -
Amo13g1090 1123 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 461 IPR027417 -
Amo13g1090 1123 ProSiteProfiles TIR domain profile. 13 179 IPR000157 GO:0007165
Amo13g1090 1123 Gene3D - 187 364 IPR027417 -
Amo13g1090 1123 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 157 IPR035897 -
Amo13g1090 1123 Gene3D - 11 185 IPR035897 -
Amo13g1090 1123 Gene3D - 367 451 IPR042197 -
Amo13g1090 1123 Coils Coil 414 434 - -
Amo13g1090 1123 Pfam NB-ARC domain 231 450 IPR002182 GO:0043531
Amo13g1090 1123 Gene3D Ribonuclease Inhibitor 727 904 IPR032675 -
Amo13g1090 1123 Gene3D Ribonuclease Inhibitor 554 726 IPR032675 -
Amo13g1090 1123 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10 903 IPR044974 GO:0006952
Amo13g1090 1123 CDD AAA 235 348 - -
Amo13g1090 1123 Pfam TIR domain 14 174 IPR000157 GO:0007165
Amo13g1090 1123 MobiDBLite consensus disorder prediction 1095 1123 - -
Amo13g1090 1123 SUPERFAMILY "Winged helix" DNA-binding domain 438 542 IPR036390 -
Amo13g1090 1123 SMART AAA_5 229 369 IPR003593 -
Amo13g1090 1123 SUPERFAMILY L domain-like 539 891 - -
Amo13g1090 1123 SMART till_3 14 154 IPR000157 GO:0007165
Amo13g1090 1123 PRINTS Disease resistance protein signature 232 247 - -
Amo13g1090 1123 PRINTS Disease resistance protein signature 309 323 - -
Amo13g1090 1123 PRINTS Disease resistance protein signature 402 416 - -
Amo13g1090 1123 PRINTS Disease resistance protein signature 845 861 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1090 Amo-Chr13 13724505 13729171 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1090 14 791 WRKY Transcription Factor Family AT4G12020 29.325 1.08e-76 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1090 - - ahf:112771910 1876.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1090 13 13724505 13729171 Amo13g1090 13 13724505 13729171 ECH