Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1086 ATGGTTAATTTTGTTGTGCTGCTTGTAATAGTAATAATAATGCATGTTGCAAATGCTCAGATACGATCTTTTAACTTCAACAAAAACTTCAACCCAGCTCAATCTCCTGAACTAAACCCAGATGGAGATGCAACTTACTCACAGTCTTTTGATCATATCCAACTCACAGGAAAAACAGATAATGCCAAGGGATTAGGAAGAATCACAACCAAGCCTATGCATCTTATGAAAAACAATTCAGAACAAAGATATGACTTCACTACCAATTTTACCTTTGTTGTTATCTCAAACAAGACCTACCATGGAGAAGGTTTGGCATTCTTCATAGCAAGCCATATGCTGCCAATTAAGAAACATGGTATGAACGGTGGAGGGCTTGGTCTTGTGCAACCTTGTCACCCTCACCCAGATGAGTACTCTTTTGTGGCTGTGGAGTTTGACACTAACTCAGATCCTTGGGACCCAATAGGCCCAGAGCCACATGTGGGAATAGATATCAATTCTATGATTTCCACCAAGTACAGCAAATGGCCTGCAGATTTCTCAGACATAACCAATGTTTACAACTGCAGTGTCGTATACAGCGCCGGAAGCAGGCGTCTCGACGTTTACTTCACCGGAGGATCCTTCAATGGCCCTGTACCAAAAAACCTTTCAAGCCACTTGGATCTCACTGATTACTTAAAAGATCCTGTTACTCTTGGCATTTCAGCTTCAACACAGAATTATACTGTTCAATTTAGACTGCTTTCATGGTCATTCATTGCAAAGTTATCAACACCAAGTAATGCCGGTGATGACAACAGAAAACGGGAGAAATTGAAGCAAGGACTAGAAATTGGCACTGCTTGGTTTTTGAGTTTGTTAGTGTTGGTCCTGGTCTTGGATTTCATACGCAAGAGAGGAAGAAGAAAACATGAACTCGATCCTATGGATCATGAATTCCAAACTGGACCTCAGAGGATCAGTTACAACATATTGGTGTCTGCCACAAATAACTTTGAAGAGGCGAAGAAGCTCGGAAAAGGCGGCTTTGGTGGTGTTTATAAAGGATATTTCAAAGATACAGACTCTTATGCTGCTGTAAAGAAGATATCAGCAGATTCAAGGCAAGGGATAAAGGAATATGCAGCTGAAGTGAAGATCATCAGCCAATTGAGACACAGGAATTTGGTTAGACTTACTGGTTGGTGTCACAAGAAGAATGACTTCATCCTGATATATGAATACATGCCAAATGGAAGCTTGGATTCTTGTCTTTTCGACGGAGTAGGCTTCTTGTCTTGGCAGGTAAGGTACAGCATAGCTTTGGGATTGGCATCAGCATTGCTGTATTTGCAAGAAGGGTGGGAACAGTGTGTGCTTCACAGGGACATTAAATCAAGCAACATAATGTTGGACTCAGATTTCAATGCTAAGCTTGGGGATTTTGGATTGGCCAGGCTTGTGAATCATGAGAAAGGTTCAAGGACCACAGTGACTGCTGGCACACTTGGTTACATAGCACCAGAATACATGAAAACAGGAAAAGTTGGGAAGGAATCTGATATATACAGTTTTGGGGTTGTTTTGTTGGAGATAGCATGCGGCAAAAAGGCTATTCATCACATAGAGATGGAGGGTCGTGTGACTCAAGTTTCATTGGTAGAGTGGGTTTGGGAGCTGTATGGGTTGAGAAGCATCACAGCAGCAGCAGATCCAAATCTATGTGTTGCATTTGATGTTCAACAAATGGAATGTATGCTTGTTGTTGGTCTTTGGTGTGCTCATCCAGATTGCCAATGCAGGCCTTCTATAAGGCAAGTGTTGAAGGTTCTTAACTTTGATGCTCCTTTACCCATTCTTCCACAAAGGATGCCTATTCTACCACCCTATCTTCCTCTATCAACAAATGAGGTCTTTTTTACTGCTATATGA 1917 0.4163 MVNFVVLLVIVIIMHVANAQIRSFNFNKNFNPAQSPELNPDGDATYSQSFDHIQLTGKTDNAKGLGRITTKPMHLMKNNSEQRYDFTTNFTFVVISNKTYHGEGLAFFIASHMLPIKKHGMNGGGLGLVQPCHPHPDEYSFVAVEFDTNSDPWDPIGPEPHVGIDINSMISTKYSKWPADFSDITNVYNCSVVYSAGSRRLDVYFTGGSFNGPVPKNLSSHLDLTDYLKDPVTLGISASTQNYTVQFRLLSWSFIAKLSTPSNAGDDNRKREKLKQGLEIGTAWFLSLLVLVLVLDFIRKRGRRKHELDPMDHEFQTGPQRISYNILVSATNNFEEAKKLGKGGFGGVYKGYFKDTDSYAAVKKISADSRQGIKEYAAEVKIISQLRHRNLVRLTGWCHKKNDFILIYEYMPNGSLDSCLFDGVGFLSWQVRYSIALGLASALLYLQEGWEQCVLHRDIKSSNIMLDSDFNAKLGDFGLARLVNHEKGSRTTVTAGTLGYIAPEYMKTGKVGKESDIYSFGVVLLEIACGKKAIHHIEMEGRVTQVSLVEWVWELYGLRSITAAADPNLCVAFDVQQMECMLVVGLWCAHPDCQCRPSIRQVLKVLNFDAPLPILPQRMPILPPYLPLSTNEVFFTAI* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1086 638 Pfam Protein kinase domain 334 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g1086 638 Pfam Legume lectin domain 23 262 IPR001220 GO:0030246
Amo13g1086 638 CDD STKc_IRAK 348 607 - -
Amo13g1086 638 PANTHER LECTIN RECEPTOR KINASE 20 636 - -
Amo13g1086 638 ProSitePatterns Legume lectins beta-chain signature. 142 148 IPR019825 -
Amo13g1086 638 ProSitePatterns Protein kinases ATP-binding region signature. 340 364 IPR017441 GO:0005524
Amo13g1086 638 SMART serkin_6 334 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g1086 638 CDD lectin_legume_LecRK_Arcelin_ConA 23 254 IPR001220 GO:0030246
Amo13g1086 638 Gene3D - 21 260 - -
Amo13g1086 638 SUPERFAMILY Concanavalin A-like lectins/glucanases 20 260 IPR013320 -
Amo13g1086 638 SUPERFAMILY Protein kinase-like (PK-like) 316 626 IPR011009 -
Amo13g1086 638 ProSiteProfiles Protein kinase domain profile. 334 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g1086 638 Gene3D Transferase(Phosphotransferase) domain 1 411 621 - -
Amo13g1086 638 PANTHER - 20 636 - -
Amo13g1086 638 ProSitePatterns Serine/Threonine protein kinases active-site signature. 454 466 IPR008271 GO:0004672|GO:0006468
Amo13g1086 638 Gene3D Phosphorylase Kinase; domain 1 319 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1086 Amo-Chr13 13595232 13597148 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1086 1 621 Receptor kinase-like Gene Family AT5G10530 42.320 7.53e-163 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Amo13g1086 Pkinase 4.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1086 - - cam:101492002 613.994