Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1083 ATGAGTGCTGAAGGAGCCAATAAAGATTGCCTAGCGTGGGCTGCAAGAGATTCATCTGGAGTCCTATCACCTTACAAATTCAGTCGCAGGGATCTTGGGAATGATGATGTTCACATAAAAATTACCCACTGTGGGGTTTGTTATGCTGATGTTGTTTGGACTAGGAATAAACATGGTGATTCCAAATATCCTGTAGTACCTGGACATGAGATTGCCGGGGTTGTGGAAAAAGTTGGTTCTAGTGTCCAGCGTTTCAAAGTTGGTGACCATGTTGGAGTAGGGACTTATGTCAACTCATGCAGGGATTGTGAGTATTGTAATGACAGACAAGAAGTTCATTGTGTGAAGGGAGCAGTTTATACCTTCAATGGCGTTGATGTTGATGGAACAATTACAAAAGGAGGATATTCAAGTTACATAGTAGTCCATGAAAGGTACTGTTATGTGATACCTAAGAATTACCCATTGGCTTCAGCTGCTCCCCTGCTATGTGCTGGAATTACTGTTTACAGTCCCATGATGCGCCACAAAATGAATCAACCTGGCAAGTCTCTAGCAGTGATTGGTCTTGGTGGTCTTGGTCATATGGCAGTGAAATTTGGAAAGGCATTCGGGTTGAATGTAACAGTTATCAGCACCAGTGTATCCAAGAAAGAAGAGGCCCTGAGCCTACTCGGTGCAGATAAATTTGTTGTTTCAACTGATAAAGAGCAAATGGCGGCACTGGCCAAGTCTTTTGACTTTATAATTGATGCGGCTTCCGGTGATCATCCGTTTGATCCTTACATGGCACTGTTGAAGATATCTGGTGCTATGGTCCTGGTTGGGTTCCCTAGTGAAGTCAAATTCAGCCCTGCTAACCTTATTCTTGGTATGAGAACCATATCAGGGAGTGTTACTGGTGGCACAAAAGAGACACAAGAGATGATTGACTTCTGCGCCGCAAATGGAATTCACCCAAGCATAGAAGTGGTTCCAATAGAGTATGCAAATCAAGCTCTTGAGAGAATGATAAATAGGGATGTGAAATATCGTTTTGATCCCAACAACAAGGACATAGTGTATGAGCAATCTGCATCACCAGTGACACCATCAATCCAACTCACAAGAAACCGGCAAGACGCTACCCAGGGTAGCAGCACTGGTCGTGCCACTTACTACCAACCCATGCACCTGTGGGACAAAGCTTCAAGGAATCTCACACACTTCACAACCCATTTCTCCTTCATCATTGATTCCCAGAATCGAACTAACTATGCAGATGGCTTCGCATTCTTTCTTGCCCCTAACGGCTCGAAGCTCCCGAATGCGGGGGGAGGCACCTTGGGTCTCGTACCGAATAACCAGACACTCAACGCAACTGAAAACCCCTTTGTGGCTGTGGAGTTTGATATCTTCTCAAATGTTGAATGGGATCCACCAGCAGAACATGTCGGCATTGACATCAACTCAATGAGGTCTGCAGCTAACGTCACATGGTTCGCTGCGGATAGCATCAAGCAAGGGAAGCTCAATCAGGCTTGGATCAGTTACGATGCTACTTCCCTCAATCTGAGTGTCACCTTCACTGGCTCTAGCAATGGCACCACACTGCTGCAACATCTATCTGCCATAGTGGACTTGAGAACTTATCTTCCGGAATATGTTACCTTTGGGTTCTCAGGTGCCACGGGAACTTCATTTGCTATACATCAAATTCTTTCATGGGATTTCAACTCGACTTTGCAAGAACTACAAGTCATTGCAAATCCCCCAGCAATGACTCCAAGCTACCCACCTGTAGTTACCGAAAAGAAGAAAGGGGCCAACAACACAGGACTAGCAGTGGGATTGGCTATGGGCGGGGTGGTTGTGGTTTTGGGTTTGGGCTTGGTTTCGTTTAAATTGTGGAAGAAAGGAAGTGATGATGAAGAGGAAGATGATCAAGATTTTGAGGAGCATATGGGGGACGATTTTGGAAGGGGAACCGGGCCTAAGAGGTATTCATATGCTGAATTAGCACGTGCAGCGGATAATTTCAAAGATGAGAACGAGCTTGGTCAGGGTGGATTTGGAGGTGTCTATAGAGGGTACCTTAAAGATATCAACTCGTACGTTGCTATCAAGAGGATATCAGAACATTCTCATCAAGGAATAAAGGAATTCGCGTCGGAAGTAAAGATCATTAGCCGGCTTAGGCACCGAAATCTTGTCCAACTGATTGGTTGGTGTCCGAAAAGGAAGAAGCTCTTGCTTGTATATGAGTACATGCCTAATGGAAGCTTAGATGTTCATCTTTTCAACAAGCAGAATCTGCTGAGATGGACAGTTAGATACAACATAGCTCGAGGCTTGGCGGCCGCACTGCTATACTTGCACGAAGAATGGGAACAATGTGTTGTGCATAGGGACATCAAATCAAGCAACATCATGCTGGATTCAGAGTTCAATGCCAAACTTGGGGATTTTGGGCTAGCAAGGCTTGTTGACCATGCAAAAGGCGCGCAAACCACGGCTCTAGCCGGTACTCTGGGCTACATGGCTCCCGAATGCAATACCACATTCAGGGCTACTAAAGAATCAGATGTGTACAGTTTTGGAGTTGTGGCATTGGAGATAGCGTGTGGAAGGAAACCCATCAAATATAATGCTCCGGAAAGGGAAATCAATATTGTAGAATGGGTGTGGGGTCTCTATGGAAGTGGAAGAATTCTTGAAGCAGCGGATGAAAGGCTAGATGGAGATTTTGTGGAGGAACAAATGAAATGCTTGATGGTTGTTGGGCTGTGGTGTGCTCACCCTGATCATAGAAGCAGGCCTTCAATGAGGCAAGCAATTCAAGTGCTTAACTTTGAAGCTCCATTACCCACTCTTCCATTGAGTTTGCCTGTCCCTACCTATGTTCACTCGTCTTCTAATTTAGCTCCATTCAGCATAGACAATTCTTCAGGGGATGTCCAATACCAGACCATGAGCTCCACCTCAAACTCAAACACAACCTCCTCCGGTGTCACCACAACTTCTGATGATGTATCTCCCTCTAAGTCACTTCTACACTCGCGGCAACATACATTAATGAAGTAA 3063 0.4522 MSAEGANKDCLAWAARDSSGVLSPYKFSRRDLGNDDVHIKITHCGVCYADVVWTRNKHGDSKYPVVPGHEIAGVVEKVGSSVQRFKVGDHVGVGTYVNSCRDCEYCNDRQEVHCVKGAVYTFNGVDVDGTITKGGYSSYIVVHERYCYVIPKNYPLASAAPLLCAGITVYSPMMRHKMNQPGKSLAVIGLGGLGHMAVKFGKAFGLNVTVISTSVSKKEEALSLLGADKFVVSTDKEQMAALAKSFDFIIDAASGDHPFDPYMALLKISGAMVLVGFPSEVKFSPANLILGMRTISGSVTGGTKETQEMIDFCAANGIHPSIEVVPIEYANQALERMINRDVKYRFDPNNKDIVYEQSASPVTPSIQLTRNRQDATQGSSTGRATYYQPMHLWDKASRNLTHFTTHFSFIIDSQNRTNYADGFAFFLAPNGSKLPNAGGGTLGLVPNNQTLNATENPFVAVEFDIFSNVEWDPPAEHVGIDINSMRSAANVTWFAADSIKQGKLNQAWISYDATSLNLSVTFTGSSNGTTLLQHLSAIVDLRTYLPEYVTFGFSGATGTSFAIHQILSWDFNSTLQELQVIANPPAMTPSYPPVVTEKKKGANNTGLAVGLAMGGVVVVLGLGLVSFKLWKKGSDDEEEDDQDFEEHMGDDFGRGTGPKRYSYAELARAADNFKDENELGQGGFGGVYRGYLKDINSYVAIKRISEHSHQGIKEFASEVKIISRLRHRNLVQLIGWCPKRKKLLLVYEYMPNGSLDVHLFNKQNLLRWTVRYNIARGLAAALLYLHEEWEQCVVHRDIKSSNIMLDSEFNAKLGDFGLARLVDHAKGAQTTALAGTLGYMAPECNTTFRATKESDVYSFGVVALEIACGRKPIKYNAPEREINIVEWVWGLYGSGRILEAADERLDGDFVEEQMKCLMVVGLWCAHPDHRSRPSMRQAIQVLNFEAPLPTLPLSLPVPTYVHSSSNLAPFSIDNSSGDVQYQTMSSTSNSNTTSSGVTTTSDDVSPSKSLLHSRQHTLMK* 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1083 1020 PANTHER - 349 1009 - -
Amo13g1083 1020 Pfam Zinc-binding dehydrogenase 192 314 IPR013149 -
Amo13g1083 1020 SUPERFAMILY Protein kinase-like (PK-like) 657 973 IPR011009 -
Amo13g1083 1020 Gene3D - 346 584 - -
Amo13g1083 1020 Gene3D - 13 345 - -
Amo13g1083 1020 Pfam Alcohol dehydrogenase GroES-like domain 35 148 IPR013154 -
Amo13g1083 1020 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Amo13g1083 1020 CDD STKc_IRAK 679 943 - -
Amo13g1083 1020 ProSitePatterns Protein kinases ATP-binding region signature. 679 702 IPR017441 GO:0005524
Amo13g1083 1020 SMART serkin_6 673 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g1083 1020 Gene3D Transferase(Phosphotransferase) domain 1 750 962 - -
Amo13g1083 1020 SUPERFAMILY GroES-like 14 183 IPR011032 -
Amo13g1083 1020 MobiDBLite consensus disorder prediction 635 656 - -
Amo13g1083 1020 CDD lectin_legume_LecRK_Arcelin_ConA 346 575 IPR001220 GO:0030246
Amo13g1083 1020 Gene3D Phosphorylase Kinase; domain 1 658 749 - -
Amo13g1083 1020 SMART PKS_ER_names_mod 20 342 IPR020843 GO:0016491
Amo13g1083 1020 Gene3D - 165 320 - -
Amo13g1083 1020 ProSiteProfiles Protein kinase domain profile. 673 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g1083 1020 ProSitePatterns Serine/Threonine protein kinases active-site signature. 793 805 IPR008271 GO:0004672|GO:0006468
Amo13g1083 1020 MobiDBLite consensus disorder prediction 978 1020 - -
Amo13g1083 1020 PANTHER RECEPTOR LECTIN KINASE 349 1009 - -
Amo13g1083 1020 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 318 IPR036291 -
Amo13g1083 1020 CDD CAD1 12 346 - -
Amo13g1083 1020 Pfam Protein kinase domain 673 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g1083 1020 ProSitePatterns Legume lectins alpha-chain signature. 545 554 IPR000985 -
Amo13g1083 1020 SUPERFAMILY Concanavalin A-like lectins/glucanases 348 577 IPR013320 -
Amo13g1083 1020 Pfam Legume lectin domain 345 579 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1083 Amo-Chr13 13570717 13575482 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1083 345 960 Receptor kinase-like Gene Family AT5G10530 47.209 0.0 542
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Amo13g1083 Pkinase 1.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1083 - - gmx:100817743 877.856