Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1082 ATGGCAGCATCTCATCAACACTACTGTGATAACAAAAGTTATCTTCTTTCTTGTTTCACCTTATTCTTTCTAGCTGTAGCATCAAGTGCAGCTCCAATAGCATTCAACTACAAGACATTTAGAAACATGGGAAACACCTTAAATCTTACAGGAGGAGATGCCTCTCTGGACATTAATAATGGAGCACTCAACCTTACTTATTATGGGACTGATAGCCTTGGCAGAGTCAAATATCACAAACTGCTGCATCTTTGGGACAAGAAAACAAGCAAGGCCACAGATTTCACCACACACTTCACCTTCTCCATCAATACACCAAACAAAACCTACAATTCGGATGGCATCACTTTCTATCTTGCTCAGCCCAACTTTCCTCTTCCAACTCCAAGATTTGGCGGCGGCATTGGTCTCCTGTCACGTGCTCAGATGCTTACTCCAAACTACACAAGCAAAGATCATTTTGTGGCAGTAGAATTTGACACCTTTGGCAATGTCGAATGGGATCCCATTCTTGGATATGATCATGTAGGTGTTGATATTAATAGTATGGCCACTCCTTACACTCGAGAATGGTTCACTAGCCAGGATGAGAGAAAATATGATGTTGATATCACTTATAATGCTACTTCAAATGTTCTGGCTGTGTTTTTCACTGGATACAAAGATAACATCACAAGGATTAAGCAGCAATTATCCGCTGATGTGGATCTGAGAGAGAAACCACCAGAATGGGTTGAATTTGGCTTCTCTTCCGCAACCGGTATGTATTATGAGTATCATACTCTTTTCTCGTGGTCCTTCAACTCTACTATGAACTTGGACTTGGACTTGGAAGCACACAGCAGGGACAATAATGAAAGAGCAACACACAAGGACAACAAGGGTAATCAAACAAAAACCGGAACAATCATAGGGGTTACTATTGGTGCATGTGCTTTAATTGGTGTTTTTGGGCTAGCTTTTCTTATGGGATGGAAGCTGAGGAGGAAAAGAGGAGTGGAGAATGTAATTAACCTTGCAATGGACAGAGATTTTGAGAGAAGCACTGGACCAAGGAGGTTTTCCTATGCAGAACTTTCTAGAGCAACTTATAACTTTGCAAATGAGCATAAAATTGGTAAGGGGGGTTTTGGGGAAGTCTACAGAGGATTTTTGAGAGACCTTAACATGCATGTTGCCATCAAGAGGATATCTCAGGGATCTCAACAAGGTGTGAGGGAGTATGCATCTGAAGTCAAGATCATTAGTCAACTGAGGCATAGGAATTTGGTTCAACTCGTTGGTTGGTGTCATGAGCAGAATGAGCTTCTACTGGTTTATGAGTTTGAGGAAAATGGAAGTTTAGATTCTTATCTGTTCAAAGGTGGGGGGTTATTAAAATGGGAAGTAAGATACAACATTGCTAGAGGCTTGGCTTCAGCTTTATTTTACTTGCATGAAGAGTGGGAGCAGTGCGTGCTTCATAGGGACATCAAACCCAGCAATGTTATGTTGGATTCCAATTTCAATGCAAAGCTTGGAGATTTTGGGTTAGCCAGATTGATGGACCATGAAGCAAGTTCGAAAACAACGAATTTAGCAGGAACATTTGGTTACTTGTCACCGGAAGCTGCAACGAGAGGGAAGACTAGTAAAGAGTCAGATGTATACAGTTATGGAATTGTTGCATTGGAGATAGCATGTGGAAGAAGGGTGGTTGAACAAAATGTGAATGAAGAGCAGATATACTTGGTGGATTGGGTTTGGGAACTGTATGGCAAAGGTGATATACTTAAAGCAGCAGATCCAGGATTAGAGTTGGGAGCATTTGAGGAAGAGGAAATGAAGAGGCTAATGACAGTTGGGCTTTGGTGTACTCACAGTGATTACCTTAAAAGGCCATCAATGAGACAAACACTTCAAGTACTCTATTTTGAAGTTCCATTGCCAAATCTCCCATCACAGGGTACTGATGCACCTAACTCTGTCAGATCTTTGCTTCCTGAGAATAATAGCCAAACACAGCCTTCAACTTCTTCAAGCAGTAGCACCTTCACTGTTGGGTCTACACACTCCAACAATAAGGCTTCTTCTCAACCTCTACTCATCTTCCCTTATTATGCATCATCCTTAACCTTCAACTTTACCAGTTTTGATTCCAACAACAATAACACCCTAAGATATGAAGCATGGGCAGAAGCAGAGGAAGAAACTATCCAGCTGATAGGAAAAGCGCACTTGAATAACAGCATTGGTCGTGCAGTGTACTACAAACCCATGCACCTGTGGGACAAAGCTTCAAGGAACCTCACACACTTCACAACCCATTTCTCATTCATCATTGATTCCCAGAATAGAACTAACTATGCAGATGGACTTGCATTCTTCCTCCGCCCCAACGGTTCCACCGTCCCCAGTGCCACGGCCGGAAGAACTCTGGGCCTCACTGTTGACAACCAAGACACATTCAACATAACTGCAGACCCCTTTGTGGCCGTGGAATTCGATATCTTTAAGAATTATTTCGATCCGCCCAATGAACATGTGGGTATTGATGTTAACTCCTTGAGGTCTGTTGCTAATACCACATGGTTTTCTAAGGCTAACATTAGGGGAGGGAAAGTCAATGAGGCTTGGATCAGTTACAATGCTACTTCCATGAATCTTAGTGTTGTCTTCACTGGTTTCAACTCAGCCACCAACACTACCATGCTGCAGAATCTGTTTGCTGTGGTTGACTTGAGAGAATATCTTCCTGAATATGTTGCAGTTGGATTCTCAGCTGCCACAGGAACTTCTTTTGCTTTGCACAAAATTCTCTCTTGGGATTTAAACTCAACTTTGGGAGACGACATAGCGAAAGCAGAATCCCCTGTTGCAATGAATCCATCTTCCACTGATAACTTCAAAGATGAGAATAAGCTTGGTCAAGGTGGATTTGGAGGTGTTTATAGAGGGTATCTCAAAGATATCAACTCCTACGTTGCCATCAAGAGGGTTTCAGAACATTCTCATCAAGGAATAAAGGAATTCGCATCGGAAGTAAAGATCATTAGCCGGCTTAGGCACCGAAATCTTGTCCAACTGATTGGTTGGTGTCCGGAAAGCAAGAAGCTCTTGCTTGTATATGAGTACATGCCTAATGGAAGTTTAGATGTTCATCTTTTCAAGAAGCAGAATCTGCTGGGTTGGACAGTTAGATACAACATAGCTCGAGGCTTGGCGGCCGCACTGCTATACTTGCACGAAGAATGGGAACAATGTGTTGTGCATAGGGACATCAAATCAAGCAACATCATGCTGGATTCAGAGTTCAATGCCAAACTTGGGGATTTTGGGCTAGCAAGGCTTGTTGACCATGCAAAAGGCGCGCAAACCACGGCTCTAGCCGGTACTCCGGGCTACATGGCTCCAGAATGCAATACTACATTCAGGGCTACTAAAGAATCAGATGTCTACAGTTTTGGAGTGGTGGCATTGGAGATAGCGTGTGGAAGGAAACCCATCACATATAAGGCTCCGGAAAGTGAAATCAATATTGTAGAATGGGTGTGGGGTCTTTATGGAAGTGGAAGGATTCTTGAAGCAGCAGATGAAAGGCTAGATGGAGATTTTGTAAAGGAACAAATGAAATGCTTGATGGTTGTTGGGCTGTGGTGTGCTCACCCATATCACAACAATAGGCCTTCAATAAGACAAGCCATTCAAGTTCTCAACTTTGAAGCTCCCTTACCCACTCTTCCAGCGAAGTTGCCAGTACCAACCTATCTTGATGGGTGA 3759 0.428 MAASHQHYCDNKSYLLSCFTLFFLAVASSAAPIAFNYKTFRNMGNTLNLTGGDASLDINNGALNLTYYGTDSLGRVKYHKLLHLWDKKTSKATDFTTHFTFSINTPNKTYNSDGITFYLAQPNFPLPTPRFGGGIGLLSRAQMLTPNYTSKDHFVAVEFDTFGNVEWDPILGYDHVGVDINSMATPYTREWFTSQDERKYDVDITYNATSNVLAVFFTGYKDNITRIKQQLSADVDLREKPPEWVEFGFSSATGMYYEYHTLFSWSFNSTMNLDLDLEAHSRDNNERATHKDNKGNQTKTGTIIGVTIGACALIGVFGLAFLMGWKLRRKRGVENVINLAMDRDFERSTGPRRFSYAELSRATYNFANEHKIGKGGFGEVYRGFLRDLNMHVAIKRISQGSQQGVREYASEVKIISQLRHRNLVQLVGWCHEQNELLLVYEFEENGSLDSYLFKGGGLLKWEVRYNIARGLASALFYLHEEWEQCVLHRDIKPSNVMLDSNFNAKLGDFGLARLMDHEASSKTTNLAGTFGYLSPEAATRGKTSKESDVYSYGIVALEIACGRRVVEQNVNEEQIYLVDWVWELYGKGDILKAADPGLELGAFEEEEMKRLMTVGLWCTHSDYLKRPSMRQTLQVLYFEVPLPNLPSQGTDAPNSVRSLLPENNSQTQPSTSSSSSTFTVGSTHSNNKASSQPLLIFPYYASSLTFNFTSFDSNNNNTLRYEAWAEAEEETIQLIGKAHLNNSIGRAVYYKPMHLWDKASRNLTHFTTHFSFIIDSQNRTNYADGLAFFLRPNGSTVPSATAGRTLGLTVDNQDTFNITADPFVAVEFDIFKNYFDPPNEHVGIDVNSLRSVANTTWFSKANIRGGKVNEAWISYNATSMNLSVVFTGFNSATNTTMLQNLFAVVDLREYLPEYVAVGFSAATGTSFALHKILSWDLNSTLGDDIAKAESPVAMNPSSTDNFKDENKLGQGGFGGVYRGYLKDINSYVAIKRVSEHSHQGIKEFASEVKIISRLRHRNLVQLIGWCPESKKLLLVYEYMPNGSLDVHLFKKQNLLGWTVRYNIARGLAAALLYLHEEWEQCVVHRDIKSSNIMLDSEFNAKLGDFGLARLVDHAKGAQTTALAGTPGYMAPECNTTFRATKESDVYSFGVVALEIACGRKPITYKAPESEINIVEWVWGLYGSGRILEAADERLDGDFVKEQMKCLMVVGLWCAHPYHNNRPSIRQAIQVLNFEAPLPTLPAKLPVPTYLDG* 1253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1082 1252 ProSiteProfiles Protein kinase domain profile. 366 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g1082 1252 PANTHER - 689 948 - -
Amo13g1082 1252 SMART serkin_6 962 1231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g1082 1252 SMART serkin_6 366 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g1082 1252 Gene3D Phosphorylase Kinase; domain 1 954 1038 - -
Amo13g1082 1252 Gene3D Phosphorylase Kinase; domain 1 351 442 - -
Amo13g1082 1252 ProSitePatterns Protein kinases ATP-binding region signature. 372 395 IPR017441 GO:0005524
Amo13g1082 1252 PANTHER RECEPTOR LECTIN KINASE 19 648 - -
Amo13g1082 1252 PANTHER RECEPTOR LECTIN KINASE 958 1252 - -
Amo13g1082 1252 ProSitePatterns Legume lectins beta-chain signature. 155 161 IPR019825 -
Amo13g1082 1252 CDD lectin_legume_LecRK_Arcelin_ConA 35 271 IPR001220 GO:0030246
Amo13g1082 1252 CDD STKc_IRAK 372 636 - -
Amo13g1082 1252 Pfam Protein kinase domain 962 1229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g1082 1252 Pfam Protein kinase domain 367 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g1082 1252 SUPERFAMILY Protein kinase-like (PK-like) 956 1239 IPR011009 -
Amo13g1082 1252 CDD STKc_IRAK 968 1232 - -
Amo13g1082 1252 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1082 1094 IPR008271 GO:0004672|GO:0006468
Amo13g1082 1252 CDD lectin_legume_LecRK_Arcelin_ConA 704 941 IPR001220 GO:0030246
Amo13g1082 1252 SUPERFAMILY Concanavalin A-like lectins/glucanases 33 271 IPR013320 -
Amo13g1082 1252 Gene3D - 701 953 - -
Amo13g1082 1252 Gene3D - 32 279 - -
Amo13g1082 1252 SUPERFAMILY Protein kinase-like (PK-like) 349 654 IPR011009 -
Amo13g1082 1252 ProSitePatterns Serine/Threonine protein kinases active-site signature. 486 498 IPR008271 GO:0004672|GO:0006468
Amo13g1082 1252 SUPERFAMILY Concanavalin A-like lectins/glucanases 701 942 IPR013320 -
Amo13g1082 1252 PANTHER RECEPTOR LECTIN KINASE 689 948 - -
Amo13g1082 1252 MobiDBLite consensus disorder prediction 649 688 - -
Amo13g1082 1252 Gene3D Transferase(Phosphotransferase) domain 1 444 651 - -
Amo13g1082 1252 Gene3D Transferase(Phosphotransferase) domain 1 1039 1251 - -
Amo13g1082 1252 ProSitePatterns Legume lectins alpha-chain signature. 911 920 IPR000985 -
Amo13g1082 1252 PANTHER - 19 648 - -
Amo13g1082 1252 PANTHER - 958 1252 - -
Amo13g1082 1252 Pfam Legume lectin domain 703 946 IPR001220 GO:0030246
Amo13g1082 1252 Pfam Legume lectin domain 34 270 IPR001220 GO:0030246
Amo13g1082 1252 ProSitePatterns Protein kinases ATP-binding region signature. 968 991 IPR017441 GO:0005524
Amo13g1082 1252 ProSiteProfiles Protein kinase domain profile. 962 1240 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1082 Amo-Chr13 13555647 13561004 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1082 13 648 Receptor kinase-like Gene Family AT5G10530 45.031 3.71e-166 507
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Amo13g1082 Pkinase 2.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1082 - - adu:107494664 802.357