Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1081 ATGACATCCCCAGAAGCAACATTCATAATCCTGTTGGCTCTTATATCTAATGCAACACCATTAGCATTCAACTACAAGCGATTCAGTGACACCATAAACACCTTAAACATTGTCGGAGATGTGTATCAAGATAACGGAGCCCTCCAACTCACTGAATACAAGAAAGACAGCCTCGGCAGAGTTACCTATTACAAACCTCTCCATCTTTGGGACAACAAAACCGGCAAGGTCACAGATTTCACCACCCATTTCAGCTTCTCCATCAACACTCCAAACAAATCCTACGATGGCGACGGCATCACCTTCTATCTAGCAGAGCCCAATTTCCCACTTCCAGTTCCAAGAGACGGTAGCGGCATTGGTCTCCTCAGCCGTTATGAGCTGAGTAATCCAAACTACACAAACGAACACCCGTTTGTGGCGGTGGAGTTTGACACCTTTGGCAACGATTGGGATCCTCCCTATGATCATGTTGGCATCGATGTTAAATCTATTGCCACTGCTTTCACTGCAGAATGGTTCAGTAGCAGGGATGAGAGAGGATATGATGCGGTTATCACTTACAATGCAGCTACCAACAATCTAAGCGTGACATTCACTGGGTACAAGGATAACGTGACAAAGATCAACCAGAATTTATGGAGTAAAGTGGATATGAGAGATGTGTTACCAGAATGGGTTGAATTTGGGTTCACTTCTGCAACTGGGTTGTTCTATGAGTATCATACTCTTTTCTCATGGTCCTTTAGTTCCATTGCAAGTATTGCAACTATATCACATGCACAAGAACCACTGGCCTTCAACTACGATCAATTCGCCGACAGAGGAGATACCTTGTATACTTCCGGTGATGTCTATGATGATAATGGATCCCTTCAACTCACGGAGCAGAAGAAAGATAGCTTCGGCAGAGTCACATATTACAAACAGTTTCACCTTTGGGACAACAACACAGGCAAGGTCACAGATTTCACAACCCATTTCACTTTTTCCATCAACACCCCAAACAAATCCTACGATGGCGATGGCATCACCTTCTACCTAGCACAGCCCAGTTTGCCAGTCCCTGATCCAAGAGATGGCAGTGGCATTGGTCTCCTGAGCCGTGATCAACTCTATACTCCAAACTACACAAAAGAACATCCCTTTGTGGCAGTGGAATTTGACACTTTTTCCAATGATTGGGATCCTCCGGATGAGAGAGGTTATGATGCTGTTATCACTTACAATTCTAGTTCCAACAATCTGAGTGTGGCTTTCACAGGGTACAAGGATAATGTCACAAAAATTGAGCAGCACTTATCTTGTGAAGTTAATCTGAGAAATGTTCTGCCAGAATGGGTTGAGTTTGGATTCACTTCAGCAACGGGGTTCTACTTTGAGTATCACACCCTCAGCTCATGGTCCTTCAACACTAGTTTGAGCACTCATGAAGCAAATGACCAGAATAGAAGCAAGAAAGGCTTGGTGATAGGGCTAGGTGCTGGTGCAGGTGTTTTAATATGTGTTTTAATGCTGGCTTGTTTTATGGGATGGAAGCTGAGGAGCAGAAAAAGGAGAGACAGTTTTGATGTTGCTATGGACAGAGATTTTGAAAGAGGCACTGGACCCAGGAGGTTTTCTTATGAAGAACTTTCTAGAGCAACTAATAATTTTGCAAAGGGACATAAAATTGGAGAGGGAGGTTTTGGTGGAGTTTACAAAGGATTCTTAAGAGATTTGAACATCCATGTTGCCATTAAGAGGATATCTCAGGGATCACAACAAGGGGTGAGAGAGTATGCATCGGAAGTCAAGATTATTAGCCAACTGAGGCACAAGAATTTGGTTCAGCTCATTGGATGGTGTCACCAGAAGAATGACCTGCTGTTGATTTATGAGTTCATGGAAAATGGAAGCTTAGATTCCTATATATTCAAAGGTAAAAGCTTGTTGACATGGGAAGTAAGATATAACATTGCTAGAGGCTTGGCTTCATCTTTATTGTACTTGCATGAAGAGTGGGAACAATGTGTGCTTCATAGGGACATCAAACCCAGCAATGTTATGTTGGATCCTAATTTCAATGTGAAGCTTGGAGATTTCGGGTTAGCAAGACTGATGGACCACGGGACAGAATCGAAAACGGCGAGTTTAGCTGGAACAATGGGATATCTGGCTCCTGAAGCTGCCACACGAGGCAAGGCAAGCAAAGAGTCAGATGTGTACAGTTTTGGAGTTGTTGCATTGGAGATAGCTTGTGGAAGAAGGATCATTGAACAAAATCTAATCGCAAATCAGATCCACTTGGTGGATTGGGTTTGGGAACTGTATCCCACAGGTAATCTTCAAGAAGCAGCGGATCCAAGATTATATGGTGTTTTTGATAAACAAGAAATGGAGAGGTTAATGATTGTTGGACTTTGGTGTACTCTAACTGATTACACTATGAGGCCTACGATAAGGCAAGTGGTTCTTGTGCTTAACTCTGAAGTTCCATTGCCCACTCTCCCATCACAACTTCATTCTTCCAACTATTTCGTCCCAAGGACAAGTTCTGCTTCTGGAAATAACCAAAGCCATCCTTCAACTTCAAGCAATAGCTCTCTCACCACGGCCATTCTCAAGCCACTATCCATGGCCACAACAACATGTCATCAGTATTATCACAAAAGCTACTTTCATCTTTCTTTTCACGTAACATTATTCACACTCCTGATATATTATGATCACCATGCAGAAGTAGAGGCAGAACCCTTATCCTTCAACTACCCGGATTTCAGTAACCCGGGATACACCTTGACCCTTTCAGGAGAGGCCTATCAGGACAACGGAGTCCTCCAACTTACCAAGTTCCATACCAAAGATAGTCTCGGCAGAGTCGTCTACAGCAAACTACTACATCTCACAGACTTCACTACCACTTTCTCCTTTTCCACCAACACCCCAAATAGATCCTTTTACGGTGATGGGATTACCTTCTTTCTTGCAAAGCCAGATTTCCCACTTCCTGATCCTAGAGATGGCAGTGGAATTGGCCTCATGAGTCGTGCCCAAGCGGGTAACTCAACCTACACAAACCAACATCCATTTGTGGCCGTGGAATTTGATACCTTTTCCAATGACTGGGATCCTCCGTATGCCCACGTGGGTGTGGATGTTGGTTCTTTGCACAGTATTTGCTCTAGACAATGGTTCCAGGTTTGGGACGAAAGAGGATATGATGTTGTTATCACTTACAAGTCTAGCACAAACAATTTGAGTGTCAACTTCACCGGGTATAAAGATAACATCACAAAAATTGAACAACACCTGTCTTGTGATGAAGTTAATCTGAGGGAAATCTTAACAACAGAATGGGTTGAATTTGGTTTCACTTCAGCAACAGGATATGCACCAGGGAAGGATTTTTCATACGAGTATCATACCCTTAAATCATGGTCCTTCAACTCTACGGACTTAGAGGCACAACATCACAAGGGTAAAAGCAAGAAAGGTCTAATTATAGGAGTGACCATTGGCGGTGTATGTATTTTGGGGCTACTAGCTTGTCTTTTCAGTTGGAAACTGATGAGGGGGAATAGCGGCTTGGAGAATGCTGATGAGGTTGCTATGGACAGAGATTTTGAACGACGCACTGGTCCTAGGAGGTTCTCCTATCAAGAACTTTCTAGAGCAACTAGCAACTTTGCAAACGGACATAAAATTGGAGAGGGAGGTTTTGGTGGAGTTTACAGAGGATTCCTAAGAGACTTGAACATCCATGTTGCCATCAAGAAGGTTTCCCAGGGATCTCAACAAGGTGTGAGGGAGTATGCATCTGAAGTCAAGATCATTAGTCAACTGAGGCATAAGAATTTGGTTCAACTCATTGGTTGGTGTCACGAGCAGAATGATCTGCTACTGGTTTATGAGTATGTCGAAAATGGGAGCTTAGATTCTTATCTGTTCAAAGGTAAAGGCCTATTAACATGGGAAGTAAGATATAAGATTGCTAGAGGCTTGGCTTCAGCATTGTTATATTTACATGAAGAGTGGGACCATTGTGTGCTTCATAGGGACATCAAACCCAGCAATGTTATGTTGGATTCTAATTTCAATGCGAAGCTCGGAGATTTCGGGTTAGCAAGACTAATGGAGCACGGGACAAGTTCGAAAACAACGGATTTAGCAGGAACATTGGGATATCTAGCTCCTGAAGCTGCAACTAGAGGGAAGGCTAGTAAAGAATCTGATGTATTCAGTTTTGGAGTAGTTATTTTGGAGATAGCATGCGGAAGAAAAGTGATTGAACAAAATAAAATTGAAAATCAGATATACTTGGTGGATTGGGTTTGGGAACTGTATGGCACAGGTATTGTTCTAGAAGCAGGTGATCCAAGATTGTATGGTGTGTTTGATAAAGAAGAAATGGAGAGGTTAATGATTGTTGGCCTTTGGTGTACTCACTCTAATTACGTTATGAGGCCCAAGATTAGTGAAGCTGCTCGTGTGCTTAACCATGAAGCTGCATTGCCCACTCTGTCATCTCAAGAACATGATGGCTCTACGTTGCTCTCAAGGATTCCTGCTTTTTCTGGGAATAACCAAACACAGCCTTCTACTTCAAGTAGCTCTGTCACTGCTGGATCTTCACAATCGGGCAGTGCAACTTCACAACTCATTTCTCCATCGTCTAAGATATTGCACACACGCTAA 4677 0.4295 MTSPEATFIILLALISNATPLAFNYKRFSDTINTLNIVGDVYQDNGALQLTEYKKDSLGRVTYYKPLHLWDNKTGKVTDFTTHFSFSINTPNKSYDGDGITFYLAEPNFPLPVPRDGSGIGLLSRYELSNPNYTNEHPFVAVEFDTFGNDWDPPYDHVGIDVKSIATAFTAEWFSSRDERGYDAVITYNAATNNLSVTFTGYKDNVTKINQNLWSKVDMRDVLPEWVEFGFTSATGLFYEYHTLFSWSFSSIASIATISHAQEPLAFNYDQFADRGDTLYTSGDVYDDNGSLQLTEQKKDSFGRVTYYKQFHLWDNNTGKVTDFTTHFTFSINTPNKSYDGDGITFYLAQPSLPVPDPRDGSGIGLLSRDQLYTPNYTKEHPFVAVEFDTFSNDWDPPDERGYDAVITYNSSSNNLSVAFTGYKDNVTKIEQHLSCEVNLRNVLPEWVEFGFTSATGFYFEYHTLSSWSFNTSLSTHEANDQNRSKKGLVIGLGAGAGVLICVLMLACFMGWKLRSRKRRDSFDVAMDRDFERGTGPRRFSYEELSRATNNFAKGHKIGEGGFGGVYKGFLRDLNIHVAIKRISQGSQQGVREYASEVKIISQLRHKNLVQLIGWCHQKNDLLLIYEFMENGSLDSYIFKGKSLLTWEVRYNIARGLASSLLYLHEEWEQCVLHRDIKPSNVMLDPNFNVKLGDFGLARLMDHGTESKTASLAGTMGYLAPEAATRGKASKESDVYSFGVVALEIACGRRIIEQNLIANQIHLVDWVWELYPTGNLQEAADPRLYGVFDKQEMERLMIVGLWCTLTDYTMRPTIRQVVLVLNSEVPLPTLPSQLHSSNYFVPRTSSASGNNQSHPSTSSNSSLTTAILKPLSMATTTCHQYYHKSYFHLSFHVTLFTLLIYYDHHAEVEAEPLSFNYPDFSNPGYTLTLSGEAYQDNGVLQLTKFHTKDSLGRVVYSKLLHLTDFTTTFSFSTNTPNRSFYGDGITFFLAKPDFPLPDPRDGSGIGLMSRAQAGNSTYTNQHPFVAVEFDTFSNDWDPPYAHVGVDVGSLHSICSRQWFQVWDERGYDVVITYKSSTNNLSVNFTGYKDNITKIEQHLSCDEVNLREILTTEWVEFGFTSATGYAPGKDFSYEYHTLKSWSFNSTDLEAQHHKGKSKKGLIIGVTIGGVCILGLLACLFSWKLMRGNSGLENADEVAMDRDFERRTGPRRFSYQELSRATSNFANGHKIGEGGFGGVYRGFLRDLNIHVAIKKVSQGSQQGVREYASEVKIISQLRHKNLVQLIGWCHEQNDLLLVYEYVENGSLDSYLFKGKGLLTWEVRYKIARGLASALLYLHEEWDHCVLHRDIKPSNVMLDSNFNAKLGDFGLARLMEHGTSSKTTDLAGTLGYLAPEAATRGKASKESDVFSFGVVILEIACGRKVIEQNKIENQIYLVDWVWELYGTGIVLEAGDPRLYGVFDKEEMERLMIVGLWCTHSNYVMRPKISEAARVLNHEAALPTLSSQEHDGSTLLSRIPAFSGNNQTQPSTSSSSVTAGSSQSGSATSQLISPSSKILHTR* 1559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1081 1558 PANTHER - 906 1554 - -
Amo13g1081 1558 SUPERFAMILY Concanavalin A-like lectins/glucanases 382 575 IPR013320 -
Amo13g1081 1558 SMART serkin_6 552 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g1081 1558 SMART serkin_6 1223 1497 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g1081 1558 Pfam Legume lectin domain 266 400 IPR001220 GO:0030246
Amo13g1081 1558 Pfam Legume lectin domain 913 1154 IPR001220 GO:0030246
Amo13g1081 1558 Pfam Legume lectin domain 22 257 IPR001220 GO:0030246
Amo13g1081 1558 Pfam Legume lectin domain 402 484 IPR001220 GO:0030246
Amo13g1081 1558 ProSitePatterns Legume lectins alpha-chain signature. 444 453 IPR000985 -
Amo13g1081 1558 SUPERFAMILY Concanavalin A-like lectins/glucanases 911 1146 IPR013320 -
Amo13g1081 1558 SUPERFAMILY Protein kinase-like (PK-like) 1206 1497 IPR011009 -
Amo13g1081 1558 SUPERFAMILY Concanavalin A-like lectins/glucanases 14 125 IPR013320 -
Amo13g1081 1558 CDD lectin_legume_LecRK_Arcelin_ConA 265 474 IPR001220 GO:0030246
Amo13g1081 1558 CDD lectin_legume_LecRK_Arcelin_ConA 21 251 IPR001220 GO:0030246
Amo13g1081 1558 ProSiteProfiles Protein kinase domain profile. 1223 1479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g1081 1558 MobiDBLite consensus disorder prediction 1513 1558 - -
Amo13g1081 1558 Gene3D - 20 260 - -
Amo13g1081 1558 ProSitePatterns Serine/Threonine protein kinases active-site signature. 672 684 IPR008271 GO:0004672|GO:0006468
Amo13g1081 1558 ProSiteProfiles Protein kinase domain profile. 552 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g1081 1558 PANTHER LECTIN RECEPTOR KINASE 257 398 - -
Amo13g1081 1558 PANTHER LECTIN RECEPTOR KINASE 906 1554 - -
Amo13g1081 1558 PANTHER LECTIN RECEPTOR KINASE 399 853 - -
Amo13g1081 1558 PANTHER LECTIN RECEPTOR KINASE 11 252 - -
Amo13g1081 1558 CDD STKc_IRAK 1229 1493 - -
Amo13g1081 1558 CDD STKc_IRAK 558 822 - -
Amo13g1081 1558 ProSitePatterns Legume lectins beta-chain signature. 140 146 IPR019825 -
Amo13g1081 1558 CDD lectin_legume_LecRK_Arcelin_ConA 913 1145 IPR001220 GO:0030246
Amo13g1081 1558 ProSitePatterns Legume lectins alpha-chain signature. 223 232 IPR000985 -
Amo13g1081 1558 ProSitePatterns Legume lectins beta-chain signature. 384 390 IPR019825 -
Amo13g1081 1558 Gene3D Transferase(Phosphotransferase) domain 1 1300 1510 - -
Amo13g1081 1558 Gene3D Transferase(Phosphotransferase) domain 1 629 842 - -
Amo13g1081 1558 Gene3D - 911 1164 - -
Amo13g1081 1558 Gene3D - 401 492 - -
Amo13g1081 1558 PANTHER - 257 398 - -
Amo13g1081 1558 PANTHER - 11 252 - -
Amo13g1081 1558 PANTHER - 399 853 - -
Amo13g1081 1558 Pfam Protein kinase domain 553 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g1081 1558 Pfam Protein kinase domain 1225 1430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g1081 1558 SUPERFAMILY Protein kinase-like (PK-like) 536 843 IPR011009 -
Amo13g1081 1558 ProSitePatterns Protein kinases ATP-binding region signature. 1229 1253 IPR017441 GO:0005524
Amo13g1081 1558 ProSitePatterns Legume lectins beta-chain signature. 1025 1031 IPR019825 -
Amo13g1081 1558 ProSitePatterns Protein kinases ATP-binding region signature. 558 581 IPR017441 GO:0005524
Amo13g1081 1558 Gene3D Phosphorylase Kinase; domain 1 1208 1299 - -
Amo13g1081 1558 Gene3D Phosphorylase Kinase; domain 1 537 628 - -
Amo13g1081 1558 Gene3D - 263 400 - -
Amo13g1081 1558 SUPERFAMILY Concanavalin A-like lectins/glucanases 137 369 IPR013320 -
Amo13g1081 1558 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1343 1355 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1081 Amo-Chr13 13542851 13553906 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1081 265 839 Receptor kinase-like Gene Family AT5G10530 44.444 3.18e-157 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Amo13g1081 Lectin_legB 1.8e-52 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1081 - - cam:101491058 1323.15