Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1076 ATGTTGCAGCTTTCTATTCAACGAGTGAAGAAGTTGAACATTTTGAGGCCGCAGATCTTTGCTTTGGGAAGTTCATATATGTCAACGGTTGCTCAGCCATCTGCCAGTAAGCGCAATCCGCAGAGGGTTCCAAATCTTATTGGAGGCAGTTTTGTTGACTCCAAATCATCATCTTTCATTGATGTCATAAACCCAGCAACCCAAGAAGTTGTTTCAAAACTTCCTTTGACTACAAATGAAGAGTTTAAAGCTGCTGTATCTGCAGCAAAAAAAGCATTTCCATCATGGCGTAACACTCCTATTACAACACGCCAGCGTGTGATGCTGAAACTTCAGGAGCTTATTCGTAGAGATATGGATAAACTTGCACTGAGTGTGACCACTGAACAAGGAAAGACGTTAAAGGATGCACAAGGAGATGTATTCCGTGGTTTAGAGGTTGTGGAACATGCTTGTGGGATGGCAACTCTACAAATGGGGGAATATGTTTCAAATGTCGCACATGGAATTGATACTTACAGCATTAGAGAACCACTTGGTGTCTGTGCTGGTATTTGTCCTTTCAACTTCCCTGCAATGATTCCCTTGTGGATGTTCCCAATTGCTGTTACATGTGGTAATACCTATGTTCTAAAGCCATCAGAGAAAGATCCAGGTGCTTCTATAATGCTAGCTGAATTGGCATTGGAGGCTGGTTTGCCGGAAGGTGTCCTAAATATAGTCCATGGAACGCATGATATTGTGAATGCTATTTGTGATGATGATGACATCAAAGCCATATCCTTTGTTGGTTCAAATGTTGCTGGAATGCACATATATTCAAGAGCAGCAGCTAAAGGGAAACGTGTTCAATCTAATATGGGGGCCAAGAATCATGCCATTGTCTTGCCAGATGCAAATGTTGATGCTACTTTAAATGCTTTAGTTGCTGCTGGTTTTGGTGCTGCTGGACAAAGGTGCATGGCTCTCAGTACAGTTATTTTTGTTGGAGGCTCAAAACCTTGGGAAACTAAACTTGTTGAGCGTGCCAAAGCCCTTAAAGTAAATGCTGGAACTGAGCATGATACTGACCTTGGTCCAGTCATCAGCAAACAGGCAAAGGAGCGGATACACAGATTAGTTCAATCTGGGGTTGACAGTGGTGCCAGACTACTGCTTGATGGAAGAAATATAGTGGTACCTGGATATGAGTCTGGAAATTTTGTTGGCCCAACCCTCCTATCGGATGTTAATGCCAACATGGAGTGCTACCAGGAGGAAATTTTTGGCCCAGTTCTTCTTGCGATGGAGGCTGAGAGCTTGGATGACGCCATAAACATTGTCAACCAAAACAAGTATGGTAATGGTGCTTCAATATTTACTACCTCGGGTGTTGCTGCAAGGAAATTTCAGACTGAGATTGAGGCTGGACAGGTTGGCATCAATGTCCCTATTCCGGTTCCTTTGCCCTTTTTCTCATTTACTGGCAACAAGGCATCATTTGCAGGGGATCTCAATTTCTATGGCAAGGCAGGAGTTAACTTCTATACACAGATCAAAACAATAACTCAGCAATGGAAGGATTCTGCAGCTGGTGGTGGCAAGGTTAACTTGGCAATGCCTACCTCTCAAAAATCTTGA 1620 0.4315 MLQLSIQRVKKLNILRPQIFALGSSYMSTVAQPSASKRNPQRVPNLIGGSFVDSKSSSFIDVINPATQEVVSKLPLTTNEEFKAAVSAAKKAFPSWRNTPITTRQRVMLKLQELIRRDMDKLALSVTTEQGKTLKDAQGDVFRGLEVVEHACGMATLQMGEYVSNVAHGIDTYSIREPLGVCAGICPFNFPAMIPLWMFPIAVTCGNTYVLKPSEKDPGASIMLAELALEAGLPEGVLNIVHGTHDIVNAICDDDDIKAISFVGSNVAGMHIYSRAAAKGKRVQSNMGAKNHAIVLPDANVDATLNALVAAGFGAAGQRCMALSTVIFVGGSKPWETKLVERAKALKVNAGTEHDTDLGPVISKQAKERIHRLVQSGVDSGARLLLDGRNIVVPGYESGNFVGPTLLSDVNANMECYQEEIFGPVLLAMEAESLDDAINIVNQNKYGNGASIFTTSGVAARKFQTEIEAGQVGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVNFYTQIKTITQQWKDSAAGGGKVNLAMPTSQKS* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1076 539 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 288 488 IPR016163 GO:0016620
Amo13g1076 539 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 313 324 IPR016160 GO:0016491
Amo13g1076 539 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 47 496 IPR016162 GO:0016491
Amo13g1076 539 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 28 539 IPR010061 GO:0004491
Amo13g1076 539 Pfam Aldehyde dehydrogenase family 51 515 IPR015590 GO:0016491
Amo13g1076 539 SUPERFAMILY ALDH-like 39 520 IPR016161 GO:0016491
Amo13g1076 539 PANTHER METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE 28 539 - -
Amo13g1076 539 CDD ALDH_F6_MMSDH 43 519 IPR010061 GO:0004491
Amo13g1076 539 TIGRFAM MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 45 519 IPR010061 GO:0004491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1076 Amo-Chr13 13505336 13511118 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1076 12 503 Aldehyde Dehydrogenase Gene Family AT2G14170 81.098 0.0 837
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1076 K00140 - gmx:100811544 966.452