Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1056 ATGGCCGCTACTTCACTTTCAAACCTCTCTTCTTCTCTCTCATCAACCGCCGCCACCACCACCACCACCACCACCGCGCTCTCCAAACCCTCCTCTCTCCCTCTCTTCCACAACAAAACCCTCCCTAAACCCACCGCCACCACGACAACACGCGCCGCCACATCCCACAACCACAACCCAATCCCCAAACCACAACAGCACCAACACTCGTCTCCCTTCTCCTTCTCCGATGACGACGAAAAGCCACGCGAAGAGTGCGGCGTCGTTGGAATCTACGGCGACCCCGAAGCCTCCCGCCTCTGRTACCTCGCACTCCACGCTCTKCAGCACCGCGGCCAAGAAGGCGCCGGAATKGTAACCGTCAACAACAACGTCCTCCAATCCATCACCGGCGTCGGCCTCGTCTCCGACGTCTTCAACGAGTCCAAGCTCGACCAGCTCTCCGGCTCTCTCGCCATCGGCCATGTCCGTTACTCCACCGCCGGACAGTCCATGCTCAAGAACGTCCAGCCTTTCGTCGCCGGATACCGCTTTGGCTCCGTCGGCGTCGCTCACAATGGTAATCTCGTAAATTACCGAACCTTAAGGGCAAAAATGGAAGACAACGGTTCCATCTTCAACACAACGTCTGATACTGAGGTGGTTCTTCACCTCATCGCAACTTCGAAGCACCGACCTTTTATTCTGAGAATCGTTGACGCCTGTGAGAAGCTCGAAGGTGCGTATTCAATGGTGTTTGTTACAGAGGACAAGCTTGTTGCTGTTAGGGACCCGTTTGGATTTAGGCCTTTGGTTATGGGAAGAAGAAGCAACGGTTCTGTGGTTTTTGCTTCTGAAACTTGCGCTCTTGATTTGATTGAAGCTACTTACGAAAGAGAAGTGTACCCTGGCGAGGTTATTGTTGTMGACAACAATGGAATTCAGAGTCTCTGCCTCATGTCTCATCCGCAACCCAAACAGTGTATATTTGAGCATATTTACTTCGCTTTACCCAATTCTGTTGTTTTTGGTAGGTCAGTGTATGAATCTAGAAGGCAATTTGGTGAGATTCTTGCAACTGAGAGCCCTGTTGATTGTGATGTTGTCATAGCTGTGCCTGATTCCGGTGTTGTCGCGGCGCTTGGATACGCCGCGAAAGCCGGTGTCCCCTTCCAGCAGGGGCTAATTAGGTCCCACTATGTTGGGAGGACCTTCATTGAACCTTCTCAGAAGATTAGGGACTTTGGCGTGAAGCTTAAGCTATCGCCGGTTCGTGCGGTTCTAGAAGGGAAGAGAGTTGTGGTGGTGGATGATTCAATTGTGAGAGGAACAACATCATCAAAGATTGTGAGGTTGTTGAAGGAGGCTGGTGCCAAAGAGGTTCACATGAGGATTGCAAGCCCACCAATCATTGGTTCTTGTTACTATGGTGTGGATACTCCAAGCTCTGAGGAGTTGATTTCTAATAGGATGAGRGTTGAGGAGATTAGGGATTTTATTGGTTCRGATTCACTTGCTTTTCTTCCATTTGATAGCTTGAGGAATTTGTTGGGCKATGAGTCCCCAAAMTTCTGTTATGCTTGTTTCTCTGGGAAGTACCCTGTTGAGCCAAGAGAACTTAAGGTGAAGAGGGTTGGTGACTTTGTTGATGATGGGTTGAATGGGAGTTTGGAAACCATTGATGGTGGCTGGGTTCAAGCAACAACACCACCACAACCAACAAGAACTCCTAAAGAGGTTAAGGCTGCTGGTACTGTTTTTTGA 1743 0.498 MAATSLSNLSSSLSSTAATTTTTTTALSKPSSLPLFHNKTLPKPTATTTTRAATSHNHNPIPKPQQHQHSSPFSFSDDDEKPREECGVVGIYGDPEASRLXYLALHALQHRGQEGAGXVTVNNNVLQSITGVGLVSDVFNESKLDQLSGSLAIGHVRYSTAGQSMLKNVQPFVAGYRFGSVGVAHNGNLVNYRTLRAKMEDNGSIFNTTSDTEVVLHLIATSKHRPFILRIVDACEKLEGAYSMVFVTEDKLVAVRDPFGFRPLVMGRRSNGSVVFASETCALDLIEATYEREVYPGEVIVVDNNGIQSLCLMSHPQPKQCIFEHIYFALPNSVVFGRSVYESRRQFGEILATESPVDCDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIGSCYYGVDTPSSEELISNRMRVEEIRDFIGSDSLAFLPFDSLRNLLGXESPXFCYACFSGKYPVEPRELKVKRVGDFVDDGLNGSLETIDGGWVQATTPPQPTRTPKEVKAAGTVF* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1056 580 MobiDBLite consensus disorder prediction 1 35 - -
Amo13g1056 580 Pfam Glutamine amidotransferase domain 164 283 IPR017932 -
Amo13g1056 580 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 2, CHLOROPLASTIC 52 558 - -
Amo13g1056 580 CDD PRTases_typeI 348 459 IPR000836 -
Amo13g1056 580 CDD GPATase_N 86 336 IPR035584 -
Amo13g1056 580 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 86 527 IPR029055 -
Amo13g1056 580 Hamap Amidophosphoribosyltransferase [purF]. 85 526 IPR005854 GO:0004044|GO:0009113
Amo13g1056 580 Pfam Phosphoribosyl transferase domain 360 455 IPR000836 -
Amo13g1056 580 Gene3D - 345 509 IPR029057 -
Amo13g1056 580 SUPERFAMILY PRTase-like 321 532 IPR029057 -
Amo13g1056 580 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 52 558 - -
Amo13g1056 580 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 86 309 IPR029055 -
Amo13g1056 580 TIGRFAM purF: amidophosphoribosyltransferase 86 527 IPR005854 GO:0004044|GO:0009113
Amo13g1056 580 MobiDBLite consensus disorder prediction 41 72 - -
Amo13g1056 580 MobiDBLite consensus disorder prediction 1 86 - -
Amo13g1056 580 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 86 305 IPR017932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1056 Amo-Chr13 12745570 12747983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1056 71 559 PRT Gene Family AT2G16570 83.773 0.0 852
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1056 K00764 - gmx:100791919 922.154
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1056 13 12745570 12747983 Amo13g1056 13 12745570 12747983 ECH