Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1054 ATGTCGCCGTCGAACGGAAACAGCAGCAAGATCCGGCGAATAGTACGGATCCGGCAGATGCTAATGCGGTGGAGGAAGAAGGCGGRGGGMAGAGCGGCGGCGGACGTGCCGGCGGGACACGTGGCGGTGTGTGTTGGACCTAGCATGAGGAGGTTCATCGTGCGCGCGACGCAGTTGAATCACCCGATCTTCCAGAAGCTTCTGCTTCAAGCGGAAGAAGAATACGGTTTCTGTAACCATGGACCTCTCGCTATTCCTTGCGACGAAGYGCTATTCGAGGAGCTTCTTCGTGTCATGACCCGACCCGAATCCGTTTTCTCTYCTTCMCTCGAAGAGTTTCAGAGAAGGTGCCACGTGGACTTCCGAAGTKAWGGRGATGGTAGRGGTAAAAAAGGTGGTGGTCGTGGAGAATCGTGGCCGTTGCTTCATGACGAGTTGATTTACTGA 447 0.5414 MSPSNGNSSKIRRIVRIRQMLMRWRKKAXGRAAADVPAGHVAVCVGPSMRRFIVRATQLNHPIFQKLLLQAEEEYGFCNHGPLAIPCDEXLFEELLRVMTRPESVFSXSLEEFQRRCHVDFRSXGDGRGKKGGGRGESWPLLHDELIY* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1054 148 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 129 IPR003676 GO:0009733
Amo13g1054 148 Pfam Auxin responsive protein 19 98 IPR003676 GO:0009733
Amo13g1054 148 PANTHER SMALL AUXIN-UP RNA-RELATED 6 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1054 Amo-Chr13 12720139 12720926 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1054 6 121 Calmodulin-binding Proteins AT4G34750 51.938 8.50e-40 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1054 K14488 - gmx:100795345 184.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1054 13 12720139 12720926 Amo13g1054 13 12720139 12720926 ECH