Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1050 ATGGGTTTTCACATTCCGGGTATTAGAAAGGTATCATCTTCTGCAGTCCAAGCAGCTTCCAAGGGGTTTGATCAAGTCCCAAAAGGCTATCTTGCTGTCTACATCGGCGATAACYTGAGGCGGTTCATGATTCCTYTATCATACTTGAACCAACCTTCRTTTCAAGAKCTACTAAACCAAGCAGAAGAAGAATTCYGATATGATKATCKGACRGGRCGCCTCACAATACCATGCAATGAGGATGAGTTCCTAAGGCTCACCTCTAAGCTTGAAAAGTTATAA 282 0.4149 MGFHIPGIRKVSSSAVQAASKGFDQVPKGYLAVYIGDNLRRFMIPLSYLNQPSFQXLLNQAEEEFXYDXXTGRLTIPCNEDEFLRLTSKLEKL* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1050 93 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 8 91 IPR003676 GO:0009733
Amo13g1050 93 PANTHER AUXIN-INDUCED PROTEIN 10A5 8 91 - -
Amo13g1050 93 Pfam Auxin responsive protein 14 88 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1050 Amo-Chr13 12678867 12679671 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1050 26 91 Calmodulin-binding Proteins AT3G43120 51.515 6.34e-17 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1050 K14488 - gmx:100786095 126.331