Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1047 ATGCTGATAATTGAAGAAAAGCTAATTGAATGGGGTATACAAGGAGACATGGGCGTGAAGGATCACATGGCATTGTCTAGGATGTGTTTCAATATAGATGAAGAAATTATGTGGAATTGGTTTACAGACTCTTATGAACTATATATACACTATTCTCTTGTGATCTCAAGCAACACAAGTCACTTGTATCCAGAAAACAAAAAGACAATGGGTTTCCGCATACCAGGTATTAGAAGGGCATCAATTAGTACAACTCAAGCAGCTTCAAAGGGGAGTGAAGTCCCAAGAGGCTATCTTGCAGTCTACATTGGAGATAAAATGAAGCGGTTCATAATTCCTATCTCATACTTGAACCAACCATTGTTTCAAGAATTACTAAGTCAGGCAGAAGAAGAATTTGGGTATGATCATCCAATTGGTGGTCTTAGAATTCCATGCCTTGAGGATGAGTTCCTAAAGCTCACCTCTCTCTGGAAGGAGTTGTAA 486 0.3889 MLIIEEKLIEWGIQGDMGVKDHMALSRMCFNIDEEIMWNWFTDSYELYIHYSLVISSNTSHLYPENKKTMGFRIPGIRRASISTTQAASKGSEVPRGYLAVYIGDKMKRFIIPISYLNQPLFQELLSQAEEEFGYDHPIGGLRIPCLEDEFLKLTSLWKEL* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1047 161 Pfam Auxin responsive protein 79 156 IPR003676 GO:0009733
Amo13g1047 161 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 77 156 IPR003676 GO:0009733
Amo13g1047 161 PANTHER AUXIN-INDUCED PROTEIN 10A5 77 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1047 Amo-Chr13 12673476 12674403 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1047 83 146 Calmodulin-binding Proteins AT3G43120 51.562 1.17e-18 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1047 K14488 - gmx:100789280 150.214