Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1046 ATGGGTTTCCGTTTGCCTGGTCTTCAAAGGCGCAATGACYTCCCAAAGGGTCACCTTGCAGTTTATGTAGGAGAAAATCAAAAGAAGCGATTTGTGATTCCTATATCATTCTTGAGTCAACCTTCAATTCAAGACTTACTAAGTCATGCTGAACAAGAATTTGGATTTGACCACCCAATGGGTGGGCTCACAATACCTTGCAAAGAAGATGTCTTCCTTGAGATCACTTCTCAGTTGCATAAGTCATAG 249 0.4137 MGFRLPGLQRRNDXPKGHLAVYVGENQKKRFVIPISFLSQPSIQDLLSHAEQEFGFDHPMGGLTIPCKEDVFLEITSQLHKS* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1046 82 Pfam Auxin responsive protein 11 77 IPR003676 GO:0009733
Amo13g1046 82 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 14 79 IPR003676 GO:0009733
Amo13g1046 82 PANTHER - 14 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1046 Amo-Chr13 12672917 12673399 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1046 13 72 Calmodulin-binding Proteins AT3G43120 55.000 8.79e-16 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1046 K14488 - gmx:112997797 142.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1046 13 12672917 12673399 Amo13g1046 13 12672917 12673399 ECH