Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1044 ATGTATGGATATAAAGTTTTCAATCTAAGGAAAATATATGAGATGTCTAAAGCATGTCTAGTAGAAGGTGGATATTGTTTGGGCCATTCCTTTAGAAGACCAACACAAAAGATGGGTTTCCCTTTACCTGCTATTCGAAGGGCTTCCTTCTCTGCTAGTCAATCATCTTCAAAATCCTTGGAAGCCCCAAAGGGGTATCTTGCAGTGTATGTTGGAGAGAAGCAGAAGCGTTTTCTGATCCCTGTATCATATTTGAACCAACCATCATTCCAAGACTTGTTGAGTCAAGCCGAATAA 297 0.3973 MYGYKVFNLRKIYEMSKACLVEGGYCLGHSFRRPTQKMGFPLPAIRRASFSASQSSSKSLEAPKGYLAVYVGEKQKRFLIPVSYLNQPSFQDLLSQAE* 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1044 98 PANTHER AUXIN-INDUCED PROTEIN 10A5 44 98 - -
Amo13g1044 98 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 44 98 IPR003676 GO:0009733
Amo13g1044 98 Pfam Auxin responsive protein 46 98 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1044 Amo-Chr13 12663498 12664030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1044 51 98 Calmodulin-binding Proteins AT3G43120 45.833 1.93e-08 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1044 - K14488 gmx:100816803 90.5077