Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1035 ATGTTTATTTCACTCTTTATAAGAAGAGAAAGCCGCTCAAACACTCTCTATCATATACAATCATACAAGATGAAGTTTCTGTTTCTTTTCTTATTCCCTTTGATTTTGTGTGTTGTGGTTCCTACCACCAGAGCACAATTATTAGATCCATTCTTTTACAAAGATACATGTCCCTCTCTCCAGTCAACTGTACGACAAGTTCTTCTTAATGTTTCGAAGGGGCCTGGAAAAGATGAGCGGCTTTTCGCCAGCTTGATAAGACTTCATTTCCACGATTGCTTCGTCCAAGGGTGTGATGGATCAATTTTGTTAAATGATACCGCTTCTATTAGAAGCGAACAACTTGCAGCGCCGAATCTGGACTCCATTCGTAGGTTGGATGTGATCAATTTGATTAAGGAAAATATCGAGAAAGCTTGTCCTGGGGTTGTTTCCTGCGCTGATATTGTCGCACTTGCTGCCGAAGTGTCTTCGGAGATGTCAAATGGTCCAACTTGGCAAGTTCCCTTGGGCAGAAGAGATAGTGAAACAGCAAGCTTCGACTTGGCAAATTCGGACATTCCTGGTCCAAAATCCAACCTCCCTCAGCTCATTTCGGCATTTCAGAAAAAGGGTCTTGATATGAATGATTTAGTGGCACTTTCAGGTGCTCACACAATTGGCAGAGGACGGTGTACACTTTCCCGTCGCCGAAACTGCAAAAATAATGGGTCAAAGGGAGAAAATGTCACAAATTTGGACCAGATAACTGCTTTTGAGTTTGATAATAATTATTATATAAATCTTCAGCGTGGTGATGGACCCTTTAACAGCGATCAAGTGCTGTTTGATACAAGGGGTGCACAGACAATCAATGCAATCAATCTGTTGGCTTCCAATCAAACACTGTTTTTTGAGGCTTTTAAAGCCTCCATGATAAAAATGAGTTTGATTGAAGTCCTTGTTGGTAAACAAGGAATCATTAGAAAGCATTGTAAT 978 0.408 MFISLFIRRESRSNTLYHIQSYKMKFLFLFLFPLILCVVVPTTRAQLLDPFFYKDTCPSLQSTVRQVLLNVSKGPGKDERLFASLIRLHFHDCFVQGCDGSILLNDTASIRSEQLAAPNLDSIRRLDVINLIKENIEKACPGVVSCADIVALAAEVSSEMSNGPTWQVPLGRRDSETASFDLANSDIPGPKSNLPQLISAFQKKGLDMNDLVALSGAHTIGRGRCTLSRRRNCKNNGSKGENVTNLDQITAFEFDNNYYINLQRGDGPFNSDQVLFDTRGAQTINAINLLASNQTLFFEAFKASMIKMSLIEVLVGKQGIIRKHCN 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1035 326 ProSiteProfiles Plant heme peroxidase family profile. 47 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo13g1035 326 Gene3D Peroxidase, domain 2 188 229 - -
Amo13g1035 326 Gene3D Peroxidase, domain 2 230 308 - -
Amo13g1035 326 Pfam Peroxidase 74 279 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo13g1035 326 Gene3D - 52 187 - -
Amo13g1035 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 210 220 IPR019793 -
Amo13g1035 326 SUPERFAMILY Heme-dependent peroxidases 48 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo13g1035 326 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo13g1035 326 PRINTS Plant peroxidase signature 124 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo13g1035 326 PRINTS Plant peroxidase signature 143 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo13g1035 326 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo13g1035 326 PRINTS Plant peroxidase signature 57 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo13g1035 326 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo13g1035 326 PRINTS Plant peroxidase signature 162 177 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo13g1035 326 CDD secretory_peroxidase 48 326 IPR033905 GO:0004601|GO:0042744
Amo13g1035 326 PANTHER PEROXIDASE 232 326 - -
Amo13g1035 326 PANTHER PEROXIDASE 34 229 - -
Amo13g1035 326 PANTHER PEROXIDASE 72-RELATED 232 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo13g1035 326 PRINTS Haem peroxidase superfamily signature 162 174 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo13g1035 326 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo13g1035 326 PRINTS Haem peroxidase superfamily signature 144 161 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo13g1035 326 PRINTS Haem peroxidase superfamily signature 82 96 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo13g1035 326 PRINTS Haem peroxidase superfamily signature 210 225 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo13g1035 326 PANTHER PEROXIDASE 72-RELATED 34 229 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo13g1035 326 Gene3D - 309 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1035 Amo-Chr13 12611922 12614756 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1035 27 325 Peroxidase AT5G06720 47.059 9.79e-92 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1035 K00430 - gmx:106796332 329.331