Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1033 ATGTCGCCGTCGAACGGAAACAGCAGCAAGATCCGGCGAATAGTACGGATCCGGCAGATGCTAATGCGGTGGAGGAAGAAGGCGGCGGGTAGAGCGGCGGCGGACGTGCCGGCGGGACACGTGGCGGTGTGTGTTGGACCTAGCATGAGGAGGTTCATCGTGCGCGCGACGCAGTTGAATCACCCGATCTTCCAGAAGCTTCTGCTTCAAGCGGAAGAAGAATACGGTTTCTGTAACCATGGACCTCTCGCTATTCCTTGCGACGAAGGGCTATTCGAGGAGCTTCTTCGTGTCATGACCCGACCCGAATCCGTTTTCTCTACTTCTCTCGAAGAGTTTCAGAGAAGGTGCCACGTGGACTTCCGAAGTAACGGCGATGGTAGTGGTAAAAAAGGTGGTGGTCGTGGAGAATCGTGGCCGTTGCTTCATGACGAGTTGATTTACTGA 447 0.5503 MSPSNGNSSKIRRIVRIRQMLMRWRKKAAGRAAADVPAGHVAVCVGPSMRRFIVRATQLNHPIFQKLLLQAEEEYGFCNHGPLAIPCDEGLFEELLRVMTRPESVFSTSLEEFQRRCHVDFRSNGDGSGKKGGGRGESWPLLHDELIY* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1033 148 Pfam Auxin responsive protein 18 98 IPR003676 GO:0009733
Amo13g1033 148 PANTHER SMALL AUXIN-UP RNA-RELATED 6 129 - -
Amo13g1033 148 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 129 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1033 Amo-Chr13 12586494 12587295 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1033 6 124 Calmodulin-binding Proteins AT4G34750 51.515 1.19e-40 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1033 K14488 - gmx:100795345 192.2