Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1027 ATGGGTTTCCGTTTACCTATTATCCGAAAGGCATCATTCTCTGCTAGCCAAGCGGCTTCAAAATCTGTAGAAGTCCCAAAGGGATATTTTGCAGTGTATGTTGGAGAAGAACAAAAGCGATATGTCATCCCAATTTCATACTTGAATCAACCTTCATTCCAAGACTTGTTGAATCAAGCTGCGGAAGAGTTTGGATATGATCATCCCAAGGGAGGTCTCACAATTCCTTGCAGTGAACATGTCTTCCAGCAAATCACTTCTCGTTTGAATTGA 273 0.4139 MGFRLPIIRKASFSASQAASKSVEVPKGYFAVYVGEEQKRYVIPISYLNQPSFQDLLNQAAEEFGYDHPKGGLTIPCSEHVFQQITSRLN* 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1027 90 Pfam Auxin responsive protein 12 88 IPR003676 GO:0009733
Amo13g1027 90 PANTHER AUXIN-INDUCED PROTEIN 6B 1 90 - -
Amo13g1027 90 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 90 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1027 Amo-Chr13 12534312 12535353 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1027 14 83 Calmodulin-binding Proteins AT3G43120 45.714 1.52e-17 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1027 - K14488 gmx:106798972 149.058