Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1023 ATGGGCTTTCGCTTACCTGGTATTAGAAAATCTACACAAGCAGCTTCAAAGGGTGGAGAAGTCTCAAAGGGGCATCTTGCAGTTTATGTTGGAGAAAAGATGAAGAGGTTCATAGTTCCAATATCATATTTGAACCAACCATCATTTCAAGACTTGCTGAGTAAAGCGGAAGAAGAATTTGGTTATGTTCATCCAATGGGTGGCCTCACAATTCCTTGCACAGAAGATGTGTTCTTAGATATCATATCATTTTTTGCTTGA 261 0.3908 MGFRLPGIRKSTQAASKGGEVSKGHLAVYVGEKMKRFIVPISYLNQPSFQDLLSKAEEEFGYVHPMGGLTIPCTEDVFLDIISFFA* 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1023 86 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 7 85 IPR003676 GO:0009733
Amo13g1023 86 Pfam Auxin responsive protein 15 83 IPR003676 GO:0009733
Amo13g1023 86 MobiDBLite consensus disorder prediction 1 20 - -
Amo13g1023 86 PANTHER AUXIN-INDUCED PROTEIN 6B 7 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1023 Amo-Chr13 12521911 12522466 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1023 20 85 Calmodulin-binding Proteins AT4G34750 46.970 7.42e-17 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1023 K14488 - gmx:100806671 135.961