Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1022 ATGTATGGATATAAAGTTTTCAATCTAAGGAAAATATATGAGATGTCTAAAGCATGTCTAGTAGAAGGTGGCTATTGTTTGGGCCATTCCTTTAGAAGACCAACACAAAAGATGGGTTTCCGTTTACCTGCTATTCGAAGGGCTTCCTTCTCTGCTAGCCAATCATCTTCAAAATCCTTGGAAGCTCCAAAGGGGTATCTTGCAGTGTATGTTGGAGAGAAGCAGAAGCGTTTTCTGATCCCTGTATCATATTTGAACCAACCATCATTCCAAGACTTGTTGAGTCAAGCCGAATAA 297 0.4007 MYGYKVFNLRKIYEMSKACLVEGGYCLGHSFRRPTQKMGFRLPAIRRASFSASQSSSKSLEAPKGYLAVYVGEKQKRFLIPVSYLNQPSFQDLLSQAE* 99
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1022 98 Pfam Auxin responsive protein 46 98 IPR003676 GO:0009733
Amo13g1022 98 PANTHER AUXIN-INDUCED PROTEIN 10A5 44 98 - -
Amo13g1022 98 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 44 98 IPR003676 GO:0009733
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Amo13g1022 Amo-Chr13 12520871 12521425 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1022 51 98 Calmodulin-binding Proteins AT3G43120 45.833 1.22e-08 47.8
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1022 - K14488 gmx:100816803 93.2041