Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1018 ATGGGATTTCGCTTACCTGCTATTAGAAGGGCATCATCTGCTGTAACCCAAGCAGCCTCCGTCCCAAAAGGCTATCTTGCAGTTTATGTTGGAGAGAAAATGAAGCGGTTTGTGATTCCTATTTCCTATTTGAGTCAACCTTCATTTCAAGAGTTACTAAGCCAAGCAGAAGAAGAATTCGGATATGGTCATCCAATGGGTGGTCTCACTATTCCTTGCAAGGAGAATGATTTTGTGGATCTCACGTCTCGCTTGAATGGACTATAG 267 0.4307 MGFRLPAIRRASSAVTQAASVPKGYLAVYVGEKMKRFVIPISYLSQPSFQELLSQAEEEFGYGHPMGGLTIPCKENDFVDLTSRLNGL* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1018 88 Pfam Auxin responsive protein 15 84 IPR003676 GO:0009733
Amo13g1018 88 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 12 87 IPR003676 GO:0009733
Amo13g1018 88 PANTHER AUXIN-INDUCED PROTEIN 10A5 12 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1018 Amo-Chr13 12491478 12492116 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1018 20 78 Calmodulin-binding Proteins AT3G43120 55.932 3.52e-18 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1018 K14488 - gmx:100806671 150.214