Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1015 ATGGTAGCCATGGGACTTATTAGGAGACAAGCTTCATCTGAATTATTTCTTCAGGATAGCATCTATATATACACCAGTTCTTGTGTCTCAACCAACACAACTCATTTGCATCTCCACAAGTATCAAAGCTCACATATTTCTCTGATACAAATCCTTCAACAACAATATATTACTTTTTCTTTTGAGCAACAAGAAACGATGGCTTTCCGCATTCCAGGTATTAGACGGGCCACATCTTTCTCTGCATCCAAGGGAACTAATGTTCCAAAAGGCTATCTTGCAGTCTATGTAGGAGATAAGATGAAGCGGTTTGTGATTCCGGTATCATACTTGAATCAGCCTTCATTTCAAGAATTACTGTGCCAGGCCGAAGAGGAATTCGGATATGATCATCCAACTGGTGGTTTGACAATTCCATGCAGTGAGGATGAGTTTCAAAACCTCACTTCTGAATTAAGTGGACAGTAA 468 0.3974 MVAMGLIRRQASSELFLQDSIYIYTSSCVSTNTTHLHLHKYQSSHISLIQILQQQYITFSFEQQETMAFRIPGIRRATSFSASKGTNVPKGYLAVYVGDKMKRFVIPVSYLNQPSFQELLCQAEEEFGYDHPTGGLTIPCSEDEFQNLTSELSGQ* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1015 155 PANTHER AUXIN-INDUCED PROTEIN 10A5 72 153 - -
Amo13g1015 155 Pfam Auxin responsive protein 79 150 IPR003676 GO:0009733
Amo13g1015 155 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 72 153 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1015 Amo-Chr13 12486975 12488066 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1015 78 148 Calmodulin-binding Proteins AT3G43120 50.704 1.34e-18 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1015 K14488 - gmx:100782363 147.132