Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1013 ATGGCTATTCGTTTGCCTTCTTCGGTGATCCATGCTAAACGTGTCCTCAGCCGGTCTCTTTCAGGTGGCAAAAAAGTGTCTGGAAATGTGCAAAAAGGGTATCTTGCAGTGTATGTTGGAGAAGAGGAGCAAAAGAAGAGATATATGGTTCCTATATCATACTTGCATGAACCTGCTTTTCAACAATTGCTAAGTGAAGCCGACGAAGAATTTGGATTTAATCACTCAATGGGAGGTCTAACAATTCCTTGCAGTGAAGACATCTTTTGCAGTCAGGTTCATCATTCATTTCACATGCTGTTCTTTCCACTGATATGCCAAAAGCATGCAACACCAAAAATGCAAAAGCTACTTGAATCGAGTGATTTGAGAAGATTTGATGATTTGTTTAAGGATTATTACAAGCAAAATGAACAGATTAATTTGAGAATCATGTATGTGGTACATGTTAAAACAAAATTAAAAAAACTTGTTCCTTCTACAAGTAATTTGAGATCTTTCCAAGAAGAAACCATGGGCTTCCGTTTACCTGGTATCAGCAAATCTACACAAGTAACCTCAAAGTGTGGAGAAGTCCCAAAAGGGTATCTTGTAGTGTATGTGGGAGAAAACATGAAGAGGTTTGTGATTCCAATAGCATACTTGAACCAACCTTCTTTTCAAGACTTGCTGAGTAAAGCAGAAGAAGAATTCGGATATGTTCATCCGATGGGTGGCCTCACAATTCCATGCAGAGAAGATATGTTCTTAGATATCATATCAGTTCTGGCTTAA 774 0.3824 MAIRLPSSVIHAKRVLSRSLSGGKKVSGNVQKGYLAVYVGEEEQKKRYMVPISYLHEPAFQQLLSEADEEFGFNHSMGGLTIPCSEDIFCSQVHHSFHMLFFPLICQKHATPKMQKLLESSDLRRFDDLFKDYYKQNEQINLRIMYVVHVKTKLKKLVPSTSNLRSFQEETMGFRLPGISKSTQVTSKCGEVPKGYLVVYVGENMKRFVIPIAYLNQPSFQDLLSKAEEEFGYVHPMGGLTIPCREDMFLDIISVLA* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1013 257 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 184 256 IPR003676 GO:0009733
Amo13g1013 257 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 10 91 IPR003676 GO:0009733
Amo13g1013 257 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY 184 256 - -
Amo13g1013 257 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY 10 91 - -
Amo13g1013 257 Pfam Auxin responsive protein 183 256 IPR003676 GO:0009733
Amo13g1013 257 Pfam Auxin responsive protein 19 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1013 Amo-Chr13 12461274 12463400 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1013 29 89 Calmodulin-binding Proteins AT4G34750 45.902 2.54e-11 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1013 K14488 - gmx:112997918 186.808