Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1007 ATGGGATTCCGTTTACCTGCTATTAGAAGGGCATCATCAGAAGTTCCGAAAGGCTATCTCGCAGTCTATGTTGGAGAGAAAATGAAGCGGTTCGTGATTCCTGTATCATACTTGAATCAACCTTTGTTTCAAGAATTACTAAACCAAGCCGAAGAAGAATTCGGATATGATCATCCAATGGGTGGTCTCACAATTCCTTGTAGTGAAGATGCTTTCTTAGATCTCAAGTCTCGCTTAGCTTGA 243 0.4115 MGFRLPAIRRASSEVPKGYLAVYVGEKMKRFVIPVSYLNQPLFQELLNQAEEEFGYDHPMGGLTIPCSEDAFLDLKSRLA* 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1007 80 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 8 79 IPR003676 GO:0009733
Amo13g1007 80 Pfam Auxin responsive protein 10 77 IPR003676 GO:0009733
Amo13g1007 80 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 8 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1007 Amo-Chr13 12421267 12421837 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1007 14 72 Calmodulin-binding Proteins AT3G43120 57.627 3.22e-20 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1007 K14488 - gmx:100806671 143.665