Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1005 ATGGAACCCCTTGGCAACTATATATACACTATATCTTGTTTTCTCTCAAAACACAAATCATTTGCATCTCCTCAAGTAATAGAACTCACATATTTCTCTCACAGCAATCCTTCAAGAACAATATATATTGCTTTTTGTGTGGAGCAACAAGAAACAATGGCTTTCCGCTTACCAAGCATTAGACGGGCCACATCAATTTCTTCATCCAAGCGGACTAATGTTCCAAAAGGCTATCTTGCAGTCTATGTTGGAGATAACCTGAGGCGGTTCGTGATTCCTATATCATACTTGAACCAACCTTTGTTTCAAGAATTACTAAACCAAGCAGAAGAAGAATTTGGTTATGATCATCCAAATGGACATCTCACAATTCCATGCAGTGAGGACGAGTTCCAAAACATCAGTTCTCGGTTGAATGGGCTGTAA 426 0.3897 MEPLGNYIYTISCFLSKHKSFASPQVIELTYFSHSNPSRTIYIAFCVEQQETMAFRLPSIRRATSISSSKRTNVPKGYLAVYVGDNLRRFVIPISYLNQPLFQELLNQAEEEFGYDHPNGHLTIPCSEDEFQNISSRLNGL* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1005 141 Pfam Auxin responsive protein 64 136 IPR003676 GO:0009733
Amo13g1005 141 PANTHER AUXIN-INDUCED PROTEIN 6B 59 139 - -
Amo13g1005 141 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 59 139 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1005 Amo-Chr13 12418097 12420539 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1005 73 132 Calmodulin-binding Proteins AT3G43120 60.000 3.81e-20 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1005 K14488 - gmx:100806671 134.806