Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1004 ATGGGACCTATTAGGAGACAAGGGCATATAAGAGGTCACATGGTGTTGTCTTATGGAATTTTTTCAAACCTAAAGGCATCACTTTCTGCATCAAAAGGGACTAATGTTCCAAAAGGCTATCTTGCAGTATATGTGGGAGATAAGATGAGGCGGTTTGTGATTCCTGTATGTTACTTGAACCAGCCTTCATTTCAAGAATTACTAAACCAAGCAGAAGAAGAATTCGGATATGATCATCCAACCGGTGGTCTCACAATTCCATGCAGTGAGGATGAGTTCTTAAATCTCACTTCTCTGTTGGGTGGCCAATAA 312 0.4071 MGPIRRQGHIRGHMVLSYGIFSNLKASLSASKGTNVPKGYLAVYVGDKMRRFVIPVCYLNQPSFQELLNQAEEEFGYDHPTGGLTIPCSEDEFLNLTSLLGGQ* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1004 103 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 23 100 IPR003676 GO:0009733
Amo13g1004 103 Pfam Auxin responsive protein 27 100 IPR003676 GO:0009733
Amo13g1004 103 PANTHER AUXIN-INDUCED PROTEIN 10A5 23 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1004 Amo-Chr13 12413810 12414766 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1004 35 93 Calmodulin-binding Proteins AT3G43120 57.627 4.27e-19 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1004 K14488 - gmx:100786095 133.65