Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1003 ATGGGTTTTCGTTTTGCTGGTATCAGAAGAAAGCTATCATTTAATTCAAACCAAGCATCTTCAAAGGCTTTGGAAGTCCCAAAAGGCTATCTTGCTGTCTATGTTGGAGAGAACATGAAGCGGTTCGTGATTCCCATTTCGTATTTGAACCAGACTTCATTTCAAGAATTACTAAGCCAAGCAGAAGAAGAATTCGGATATGATCATCCAATGGGTGGTCTCACTATTCCATGCAGTGAGGAAGCCTTCTTGGACCTCACTTCTTGCTTCAACTGA 276 0.413 MGFRFAGIRRKLSFNSNQASSKALEVPKGYLAVYVGENMKRFVIPISYLNQTSFQELLSQAEEEFGYDHPMGGLTIPCSEEAFLDLTSCFN* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1003 91 Pfam Auxin responsive protein 9 88 IPR003676 GO:0009733
Amo13g1003 91 PANTHER AUXIN-INDUCED PROTEIN 10A5 1 91 - -
Amo13g1003 91 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 91 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1003 Amo-Chr13 12411993 12412464 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1003 18 90 Calmodulin-binding Proteins AT3G43120 50.685 4.56e-21 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1003 K14488 - aip:110269930 181.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1003 13 12411993 12412464 Amo13g1003 13 12411993 12412464 ECH