Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1002 ATGGGTTTTCGGTTACCTGGTATTGTAAGAAAGGCATCATTTACTTCATCTTCAAAAACTATGGAAATTCCAAAAGGTTATCTTGCAGTTTATGTTGGAGAGAAAATGAAGCGGTTTGTGATCCCTATATCATACTTGAACCAGCCTTCATTTCAAGACTTGCTAAGTCAAGCTGAGGAAGAATTTGGATATGATCATCCAATGGGTGGCCTCACAATTCCTTGTGAAGAAAATATGTTCTTAGATATCACTTCTCGCTTGAGTTGA 267 0.3745 MGFRLPGIVRKASFTSSSKTMEIPKGYLAVYVGEKMKRFVIPISYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCEENMFLDITSRLS* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1002 88 Pfam Auxin responsive protein 16 86 IPR003676 GO:0009733
Amo13g1002 88 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 87 IPR003676 GO:0009733
Amo13g1002 88 PANTHER AUXIN-INDUCED PROTEIN 10A5 1 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1002 Amo-Chr13 12393776 12394252 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1002 22 80 Calmodulin-binding Proteins AT3G43120 55.932 2.86e-19 75.1