Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1000 ATGGGTTTCCGTTTACCTGTTATTCGAAGGACATCATCATTCTCAGGTAGCCAAGCAGCTTCGAAATCTGTGGAAGTCCCAAAGGGGCATCTAGCAGTGTATGTCGGAGAGAAACAGAAGCGGTTTGTGATCCCCGTTTCATACTTGAACCAACCTTCAATCCAAGACTTGTTGAGCCAAGCTGAGGAAGAGTTTGGATATGATCATCCTATGGGAGGTCTAACAATTCCTTGCAGTGAAGATGTCTTCCAACAAATCACTTCTTGCTTGAATTGA 276 0.442 MGFRLPVIRRTSSFSGSQAASKSVEVPKGHLAVYVGEKQKRFVIPVSYLNQPSIQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQQITSCLN* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1000 91 PANTHER AUXIN-INDUCED PROTEIN 6B 2 91 - -
Amo13g1000 91 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 2 91 IPR003676 GO:0009733
Amo13g1000 91 Pfam Auxin responsive protein 13 90 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1000 Amo-Chr13 12389695 12389970 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1000 18 90 Calmodulin-binding Proteins AT5G20810 47.945 2.03e-18 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1000 K14488 - gmx:106798972 153.68