Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0998 ATGGGATTCAGATTGCCTAGTCTTCAAAAGAAAACTTCTGTTCCAAAAGGTTATCTTGCTGTTTATGTTGGAGAGAACCAAAAGAAGCGATTCGTGATACCTATATCATACTTGAACAATCCTTCAATTCAAGACTTGCTAAGTCAAGTTGAACAAGAATTCGGATTCGATCATCCAATGGGTGGCCTCACAATTCCTTGCAGAGAAGATGTCTTCCTAGATATCACTTCTCGCTTGCAAAGATCATAA 249 0.3855 MGFRLPSLQKKTSVPKGYLAVYVGENQKKRFVIPISYLNNPSIQDLLSQVEQEFGFDHPMGGLTIPCREDVFLDITSRLQRS* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0998 82 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 13 79 IPR003676 GO:0009733
Amo13g0998 82 Pfam Auxin responsive protein 10 78 IPR003676 GO:0009733
Amo13g0998 82 PANTHER - 13 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0998 Amo-Chr13 12387258 12387821 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0998 14 72 Calmodulin-binding Proteins AT3G43120 52.542 3.21e-15 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0998 K14488 - ahf:114924948 159.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0998 13 12387258 12387821 Amo13g0998 13 12387258 12387821 ECH