LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo13g0986	ATGGACGACGGGGAGCTTGATTTCTCGAACCAGGAAGTGTTCTCAAGTCCAAACATGGCTGAACTTCCAAGCAGTGGATCAATGGATAGCTTCTTTGAGGAACTCCTCAAGGACAGCCATGCTTGCACGCATACCCACACCTGTAACCCCCCTGGTCCTGATCATTCCCATACTCATACCTGCTACCATGTTCATACCAAGATTGTACCTGCGCCGTCTGAGGAGCAAGTTGGAACTGACGACACTGCTGAGTCTGCTGAAAAGAAGTCAAAGAAGCGCCCATTGGGTAATCGGGAAGCCGTACGCAAGTACCGCGAGAAGAAGAAGGCTCGGGCTGCTTCTTTGGAGGATGAGGTTGTCAAATTGAGAGCTTTGAACCAGCACTTGATGAGGAAGTTGCAAAGCCAGGCTGCTTTGGAGGCAGAAATATCGAGGTTGAAGTGCTTGCTAGTTGACATTAGGGGCAGGATTGAAGGAGAAATTGGAACATTCCCATATCAGAAGCCAGCGGCTCCTGCTGTGAACCCGCCAGCACAGAACTTACCTGTCTCTTATGTGATGAACCCTTGTAACTTGCAGTGTGATGATCGGGTCTATTGCCTTCACCCGGGAGCAGATGGAAAGATTGCCGAAGGTGCATCACTAACTACTGAAGGATTTAATGGTTGTGAATTTGAGAATCTTCAGTGCCTAGCAAGCCAGAATCCGGCCCTTAAGGATCTACCTTCTTGTGGAGTTGGACAAACAGTGTCTAATGTGAATTCTTCTGCATCAAACAAAAGAAAAGGGGGTTCTCGTGCAATGACAGCTGGCTGA	816	0.4865	MDDGELDFSNQEVFSSPNMAELPSSGSMDSFFEELLKDSHACTHTHTCNPPGPDHSHTHTCYHVHTKIVPAPSEEQVGTDDTAESAEKKSKKRPLGNREAVRKYREKKKARAASLEDEVVKLRALNQHLMRKLQSQAALEAEISRLKCLLVDIRGRIEGEIGTFPYQKPAAPAVNPPAQNLPVSYVMNPCNLQCDDRVYCLHPGADGKIAEGASLTTEGFNGCEFENLQCLASQNPALKDLPSCGVGQTVSNVNSSASNKRKGGSRAMTAG*	272

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo13g0986	271	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	87	153	IPR004827	GO:0003700\|GO:0006355
	Amo13g0986	271	PANTHER	CCAAT/ENHANCER BINDING PROTEIN	1	242	-	-
	Amo13g0986	271	Gene3D	-	77	153	-	-
	Amo13g0986	271	MobiDBLite	consensus disorder prediction	9	23	-	-
	Amo13g0986	271	Pfam	Basic region leucine zipper	87	142	IPR004827	GO:0003700\|GO:0006355
	Amo13g0986	271	MobiDBLite	consensus disorder prediction	72	106	-	-
	Amo13g0986	271	MobiDBLite	consensus disorder prediction	1	23	-	-
	Amo13g0986	271	MobiDBLite	consensus disorder prediction	81	103	-	-
	Amo13g0986	271	Coils	Coil	98	132	-	-
	Amo13g0986	271	SUPERFAMILY	Leucine zipper domain	89	136	IPR046347	GO:0003700\|GO:0006355
	Amo13g0986	271	MobiDBLite	consensus disorder prediction	252	271	-	-
	Amo13g0986	271	PANTHER	BASIC LEUCINE ZIPPER 23	1	242	-	-
	Amo13g0986	271	CDD	bZIP	91	144	-	-
	Amo13g0986	271	SMART	brlzneu	85	152	IPR004827	GO:0003700\|GO:0006355

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Amo13g0986	1	270	bZIP Transcription Factor Family	AT4G35040	64.103	2.08e-119	340

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Amo13g0986		bZIP_2	3.4e-13	CL0018

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo13g0986	K25785		-	gmx:780549	434.876