Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0985 ATGTTATTCTCAAACCGTGGCTGCTTAGGGAACAATAATGAGATGGATGTTCATTCAAGAAGTGATGATGATGATGCTAGTGTGGTCAACGACAACCAACATATAATTGCAGTTGAGAGAAGGTTTGTTTTGGTTGGGATTAGAATAGATAGCCATAGCAGACATCTCCTCAACTGGGCACTTTTTAAAGTTGCTGAACCTGGGGATTGTGTTATTGCACTCCACATAGTAAAAAATCCAGCTTATGTTTCCAAAAATAAGACTTTGATAGATGGATACTTAGAGGTTTATGAAGGACTATGTGATGTGAGGAAGGTAGGACTTACTGGTCAAATCCTGACAGGAGGTTCAATCAAAGACATTCTTGTTAGAGAAGCAAAAAACCATTCTGCTGTGGCTCTTGTGGTAGGGGGTCGAGCTGCCACAGCTAAATATTGTGCCAAACGACTTCCAACTACTACCAATGTTCTAGCCATTCAAGATTCAAGAATTGTCTTCAGGAGGTGCACCAATAAAGAACTACCACTATCAGGTGGTTTGTTAGTGGATCCAAGACCAAGCTTAAGCATAGAAAGCATGAGTGATAGAGTAGTTCAGTCAGAATTTGGTGACTCTGAGTTGGAGATTGAGAAATCAAGCCATTGGGGTACCAGGGAATCAAAGCAAGAATCGTTAAGCGGAACAGGGAAGTTCAAGACAAGGTCATTATCTATGTTTTCAGGTGATCCTGCTGAGCTGAAGCTTGGATGGCCTCTGCTCCTCAGAGCCAATTCAGAAATCTCACAAAACCTTCATGCAAGGGACATGTCGGTAGTGAAATGGGTGATGAGATTTCCGGATCGTTCGCCACATGGAAGTCCTCACTCTTCCATCGAGGAGGGAAACCTGTCTGAAAGAGGCATAAGTGATTTCGAGGATGAGAGCTCTAAAAATGGTTCACCTCTATCTTCTCAGCTACCAAAGGGAATAGAAGGGATGCTTAACCTCAATTCACTCAATTGCAAATGGTTCAGCCTTGAAGTTCTGAAGTCTTGCACTAGCCAATTTTCTTCAGAAAACTTGATTGGGAAAGGAGGGTGCAATCGTGTTTACAGAGGAACTCTCCCTGATGGAAAGCCAATTGCAGTTAAAGTTTTGCAGTCATCAAAAGAAGCACGGAAAGAGTTTGCCCTTGAGGTGGAAATAATATCATCATTGGAGCACAGAAACATCACTCCTCTGCTTGGAATTTGCATTGAGGACAGTGAGTTAATCTCTGTTTATGATTATTTCCCCAAAGGGAGCTTAGAGGAAAATTTACACGGAAGGGACAAGGATGGTCCCATCTTATCATGGGAATTAAGATTTAAAATAGCTCTTGGAATAGCTGAAGCCTTGGATTACCTGCACAGGGAAACTCTGAAGCCTGTAATACATAGAGATGTCAAGTCCTCAAACATTCTTCTTTCCCATGAATTTGAACCACAGTTATCTGATTTTGGGCTTGCAATATGGGGACCAACAACTACATCTTTTCTGACAGAAGAAGATGTTGTAGGAACATTTGGTTATCTTGCTCCTGAGTACTTCATGTATGGAAAAGTCAGTGACAAGATAGATGTTTATGCCTTTGGTATAGTGCTACTTGAACTCATATCAGGGAGGGAACCTATCAATCCTGAACCTTGCAAAGGACAGGAAAGCTTGGTGGTGTGGGTAAGGCCTTAA 1707 0.4189 MLFSNRGCLGNNNEMDVHSRSDDDDASVVNDNQHIIAVERRFVLVGIRIDSHSRHLLNWALFKVAEPGDCVIALHIVKNPAYVSKNKTLIDGYLEVYEGLCDVRKVGLTGQILTGGSIKDILVREAKNHSAVALVVGGRAATAKYCAKRLPTTTNVLAIQDSRIVFRRCTNKELPLSGGLLVDPRPSLSIESMSDRVVQSEFGDSELEIEKSSHWGTRESKQESLSGTGKFKTRSLSMFSGDPAELKLGWPLLLRANSEISQNLHARDMSVVKWVMRFPDRSPHGSPHSSIEEGNLSERGISDFEDESSKNGSPLSSQLPKGIEGMLNLNSLNCKWFSLEVLKSCTSQFSSENLIGKGGCNRVYRGTLPDGKPIAVKVLQSSKEARKEFALEVEIISSLEHRNITPLLGICIEDSELISVYDYFPKGSLEENLHGRDKDGPILSWELRFKIALGIAEALDYLHRETLKPVIHRDVKSSNILLSHEFEPQLSDFGLAIWGPTTTSFLTEEDVVGTFGYLAPEYFMYGKVSDKIDVYAFGIVLLELISGREPINPEPCKGQESLVVWVRP* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0985 568 PANTHER OS01G0253100 PROTEIN 40 566 IPR045271 GO:0004714|GO:0006468
Amo13g0985 568 Gene3D Transferase(Phosphotransferase) domain 1 424 567 - -
Amo13g0985 568 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 40 566 - -
Amo13g0985 568 Gene3D Phosphorylase Kinase; domain 1 316 423 - -
Amo13g0985 568 SMART serkin_6 349 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g0985 568 Pfam Protein kinase domain 350 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g0985 568 SUPERFAMILY Protein kinase-like (PK-like) 331 558 IPR011009 -
Amo13g0985 568 Gene3D HUPs 18 150 IPR014729 -
Amo13g0985 568 ProSiteProfiles Protein kinase domain profile. 349 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g0985 568 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Amo13g0985 568 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 43 141 - -
Amo13g0985 568 CDD USP_Like 43 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0985 Amo-Chr13 12285257 12289223 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0985 337 568 Trihelix Transcription Factor Family AT1G70460 48.927 1.52e-67 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Amo13g0985 Pkinase 3.9e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0985 - - gmx:100789189 788.875