Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0971 ATGGGAAGCTCCTCCTTCTCGGCGGGATCCCGTGTCTCCACTGCCAGCAAGTGGCTGGGCTTCGTGGCTGCCGTGTGGATCCAGTGTATCTCCGGCAACAACTACACCTTCTCCAACTACTCCGACGCACTCAAGTCCCTCATGCACCTCACTCAGGTGGAGCTCAACTCCCTCTCCGTCGCCAAAGACATCGGAAAGGCATTCGGCCTCGTTGCCGGCCTCGCCTCCGACCGCCTCCCCACGTGGTCCATCCTCCTCATAGGCTCCCTCGAAGGCCTCATCGCATACGGCGTCCAGTGGCTCGTCGTCAGCCAGAAAATCCAACCCCTCCCTTACTGGCAGATGTGTGTTTTTCTCTGCATGGGAGGGAACAGCACCACGTGGATGAACACTGCGGTGCTCGTCACTTGCATACGCAACTTCCGGAGAAACCGTGGTCCCGTCTCCGGCATTCTCAAGGGCTTTGTAGGGCTGAGCACCGCCATCTTCACCAGCCTTTGCTCCGCTCTCTTCTCCGACGACCCTGCTGCATTCCTCCTCATGCTCGCTCTCATCCCCCTCGCAGTTTGCGTCTCCGGAATCTTCTTCCTCCATGAGGTTCCGCCGGCGAAGTCGACCGCCGCCGCCGATACAGAAGAGTCCAAGTACTTCGGCATATTCAACGCCGTTGCGGTCGTCGTCGCAGTTTACCTCTTGGCCTACGGGTTCATCCCCAACCCTAGTACCTTGTTCTCTCGCGTGTTCACCGGAGTTTTGCTCGTTTTGCTGGCGGCGCCGTTGGCCATTCCCATTCACGCTTACTTCTCAGAGAAGCTATTGAAACCGGTTCTGGACATCGAGGGTCAGAACGGCCAGCGGGTGAACGAGCCTCTGCTTCAGAACGGCAACAGGGAGGAGGAAGCGGCGGCGGTGGCGGCTGCGGCGGCAGAGGAGGAGACGGCTGTGGTGATTCTAGAGAAGGGAAGGGCGGCTATCGGGGAGGAGCACACTATATCGGAGGTGCTGAGGAGCGTTGATTTTTGGATACTGTTTGTGTCGTTTCTGTGTGGGGTTGGAACAGGAATGGCGGTTCAGAATAATATGGGTCAAATCGGTTTGGCCCTCGGGTACACCGACGTTTCTATCTTTGTGTCTTTGACCAGCATTTGGGGCTTCTTTGGAAGAATCGTTTCGGGTTCGGTTTCGGAGCACTTCATCAGGAAGGCTGCAACTCCTAGACCTCTTTGGAATGCAGCATCTCAGATTCTGATGGCTGTGGGTTACATACTTCTGGCAATGGCTATGCCTGGTTCTCTCTATATTGGGTCTACTGTAGTTGGCATATGCTATGGAGTGAGAATGGCTATTACAGTTCCAGCAGCCTCTGAGCTATTTGGGCTCAAATACTATGGTCTCATCTACAACATTCTCATCCTCAACCTTCCCCTTGGATCTTTCCTCTTTTCGGGCCTGCTTGCCGGCATACTCTACGATATGGAAGCTACCACCACTGCCGGAGGAGGCAACACCTGTGTGGGAGGCCACTGTTACAGGCTAGTCTTTGTAGTCATGACTGCAGCATGTGTACTTGGTTTCTTCTTGGACATTTGGATGTCATTCAGAACCAAGCATGTTTACAAGAAGATTTCCATGAGCAGAAAGTCCAAGAAATCTTCCTCGGTCACATCAAGTAGCTAA 1677 0.5444 MGSSSFSAGSRVSTASKWLGFVAAVWIQCISGNNYTFSNYSDALKSLMHLTQVELNSLSVAKDIGKAFGLVAGLASDRLPTWSILLIGSLEGLIAYGVQWLVVSQKIQPLPYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGFVGLSTAIFTSLCSALFSDDPAAFLLMLALIPLAVCVSGIFFLHEVPPAKSTAAADTEESKYFGIFNAVAVVVAVYLLAYGFIPNPSTLFSRVFTGVLLVLLAAPLAIPIHAYFSEKLLKPVLDIEGQNGQRVNEPLLQNGNREEEAAAVAAAAAEEETAVVILEKGRAAIGEEHTISEVLRSVDFWILFVSFLCGVGTGMAVQNNMGQIGLALGYTDVSIFVSLTSIWGFFGRIVSGSVSEHFIRKAATPRPLWNAASQILMAVGYILLAMAMPGSLYIGSTVVGICYGVRMAITVPAASELFGLKYYGLIYNILILNLPLGSFLFSGLLAGILYDMEATTTAGGGNTCVGGHCYRLVFVVMTAACVLGFFLDIWMSFRTKHVYKKISMSRKSKKSSSVTSSS* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0971 558 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 553 - -
Amo13g0971 558 CDD MFS_Mch1p_like 16 524 - -
Amo13g0971 558 Gene3D MFS general substrate transporter like domains 14 211 IPR036259 -
Amo13g0971 558 Gene3D MFS general substrate transporter like domains 333 539 IPR036259 -
Amo13g0971 558 SUPERFAMILY MFS general substrate transporter 18 537 IPR036259 -
Amo13g0971 558 Pfam Nodulin-like 17 264 IPR010658 -
Amo13g0971 558 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 9 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0971 Amo-Chr13 12053786 12057437 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0971 15 551 Nodulin-like Gene Family AT4G34950 69.369 0.0 785
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0971 - - adu:107476550 976.467