Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0943 ATGGACTCCTTAGATTTAATTGTTATTTTTTTAGCCATTGTCTCATTCTTCTTCATCCACACATGGCTGTCCAACAGAAATAACCTCGTAATTGATTGGCCCTTCTTTGGTATGCTACCAGCACTTTTATGTAATCTATCCAATATCCATGATTATGCAACCACTATTTTGAAGCACTATCAAGGTACTTTCCTGTTCAAAGGTCCCTGGCTCACAAACCTTGACTTTCTCATCACCGTTGACCCTATGAACGTGCACCACATTACCAGCAAGAACTTTGACAACTACATTAAAGGGCCTAAGTTCTATGAGATTTTTGAAATCATGGGAGATGGCATCTTTAACATCGATTCCGACAAATGGAAGCGCAACAGGGACACACTGCACTCGTTGTTCAAACAAAACTCGTTTGAGAGTTCGTTTGTGAAAACCATTCATAAGAAGCTGGAGAGTTGCCTAGTTCCACTTCTCAATGATGCATCGGAACTTGGAACCATTGTGGACTTGCAAGACATTTTTCAGAGATTCACCTTTGACAACATCTGCTCCATAGTGCTGGGCTTTGATCCTAACTCCCTTCCTAACAAGCTCATGGATGAGTTCCCGGAAAACGCTTTTGAGACAGCTTTCAACAAGATGGAAGATGGAATGTTCTACAGACACATTGCCCCAAGATTTTTGTGGAAGCTTCAAAAGTGGCTCCAAATTGGACAAGAGAAGAGCTACGGTGAATGTCGAAAAATAATTGACCAATTCTTGCATCAATTTATATCATCCACATTCCAAGAGCAAAACAAATTCAACTACACCAAAGATGATGATGAATCGAAATTTAACATGCTTAAAGCTCTTGTAATGGAAAGTGGAATGGAAACAATAGAGCCCAAGTTTCTAAGAGACAATGCACTTAATCTCTTAGCAGCAGGAAGGGATGCAATCAGTGCAAGTCTCAGTTGGTTTTTTTGGCTGGTTTCAACCCACCCTCTTGTTGAAGCCAAGATTCTTGAAGAATTTAGAGCAAACCTGATAACCAAGGAAGAAAATTGGGTCATCACTTCAAGGTTAGAAATTCTTAACAAGCTAGTTTATCTGCATGGAGCTTTATGTGAAGCATTGAGACTTTTCCCTCCACTTCCTTTTGAACACAAATGTGCAGTTAAATCTGATATACTTCCTAGTGGGCATCGTGTTAATGCAAATACTATGATACTTTACTCTTTGTACTCAATGGGAAGAATGGAACAAATATGGGGAGAAGATTGCTTGGAGTTTAAGCCAGAAAGGTGGATTTCTGAAAAGGGAAGCATCATACACGTACCATCTTACAAGTTCATAGCTTTCAATGGAGGCCCAAGAAGTTGTTTGGGTAAAAATATAAGCTTTATTCAGATGAAGATCATCGCCATTGCTTTGCTGTTGAATTTTCAGTTTGAGGTGGTGAAAGGGCATAATGTGTGCCCATGTCTTTCTGTTATTCTTCACATGAAACATGGCTTGAAGGTCAAGGTTACTAAAAGAGAAATTGTATTTGATATTGATATTGATATTGGTATATGA 1557 0.3905 MDSLDLIVIFLAIVSFFFIHTWLSNRNNLVIDWPFFGMLPALLCNLSNIHDYATTILKHYQGTFLFKGPWLTNLDFLITVDPMNVHHITSKNFDNYIKGPKFYEIFEIMGDGIFNIDSDKWKRNRDTLHSLFKQNSFESSFVKTIHKKLESCLVPLLNDASELGTIVDLQDIFQRFTFDNICSIVLGFDPNSLPNKLMDEFPENAFETAFNKMEDGMFYRHIAPRFLWKLQKWLQIGQEKSYGECRKIIDQFLHQFISSTFQEQNKFNYTKDDDESKFNMLKALVMESGMETIEPKFLRDNALNLLAAGRDAISASLSWFFWLVSTHPLVEAKILEEFRANLITKEENWVITSRLEILNKLVYLHGALCEALRLFPPLPFEHKCAVKSDILPSGHRVNANTMILYSLYSMGRMEQIWGEDCLEFKPERWISEKGSIIHVPSYKFIAFNGGPRSCLGKNISFIQMKIIAIALLLNFQFEVVKGHNVCPCLSVILHMKHGLKVKVTKREIVFDIDIDIGI* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0943 518 PANTHER CYTOCHROME P450 FAMILY PROTEIN 9 507 - -
Amo13g0943 518 Gene3D Cytochrome P450 21 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0943 518 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0943 518 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0943 518 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0943 518 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0943 518 SUPERFAMILY Cytochrome P450 33 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0943 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Amo13g0943 518 PANTHER CYTOCHROME P450 9 507 - -
Amo13g0943 518 Pfam Cytochrome P450 33 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0943 518 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0943 518 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0943 518 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0943 518 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0943 Amo-Chr13 11572701 11574427 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0943 1 506 Cytochrome P450 AT4G32170 44.553 9.29e-159 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0943 - - gmx:100791312 594.734