Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0939 ATGGACTTCTTAGATTTTATTCTTATTTTTGTAGCCATTGCCTCATTCTTATTCATCCACACTTGGAGGTCTAATAGAAAAAATCCCATAATTAATTTGCGCTTCTTTGGTATGCTACCATCAGTTTTATGTAATCTTTCCAATATCCATGATCACGCAACAACCACTTTGAAGCAATGTGGAGGTACTTTTTTGTTCAAAGGTCCCTGGTTCACAAACCTCAACTTTCTCATCACCAGTGATCCTATGAATGTGCACCACATTACTAGCAAGAACTTTGACAACTACATCAAAGGCTCTGAGTATTATGAGATCTTTGAAATACTCGGAGATGGCATCTTTAACACTGATTCTCACAAATGGAAGCATAGCAGGAACATACTTCATTCATTGTTCAGACAAAACTCGTTTGAGAGTTTAGTTGTGAAAACCATTCATAAGAAGCTCCACAGTTGCCTAGTTCCACTTCTCAACGATGTATCAGAATCAGGAACTGTTGTGGACTTGCAAGACATCTTTCAGAGAATCAGTTTTGACAACATCTGCTCCATAGTGTTGGGGTTTGATCCTAAATCCCTTCCTAACAAGCTCATCGAGTTCCCGGAAGTTGCTTTCGAGAAAGCTTTCAACATGGCAGAGGATGCAATATTCTACAGACACCTTGTCCCAAGGTTTTTATGGAAGCTTCAGAAATGGCTCCAAATTGGACAAGGGAAGACCTATACTGAATGTGAAAAGATAGTTGACCAATTCTTGCATCAGTGTATATCATCCACATTCCAAGAGAAAAGCAAAGTCAAGTGCACCAAAGATGATGATGAACCAACATTTAACATGCTCAAAGCTCTTGTGGAGGAAAGTGGAATGGAACAAATAGATCGCAAGGATACAATTAGTTCAAGTCTCAGTTGGTTTTTCTGGCTAGTTTCAACCCACCCTGTTGTTGAAGCCAAGATCCTTGAAGAAATCAGAGCAAACTTTATAACCAAAGAAGAATATTGGCTCATCACTTCAAGGTTAGAAAATCTTAACAAGCTAGTTTACCTGCATGGAGCTATGTGTGAAGCATTGAGACTTTTTCCTCCAGTTCCTTTCGAGCACAAATCTGCAGTTAAATCTGATATACTCCCCAGTGGACATCGTGTTAATGCAAATAGTATGGTAATTTACTCTCTATATTCAATGGGAAGAATGGAACAAACATGGGGAGAAGATTGCTTGGAGTTCAAGCCAGAAAGGTGGGTTTCTGAAAAGGGAAGCATCATACACATACCATCTTACAAGTTCATAGCTTTCAATGCAGGACCAAGAAGTTGTTTGGGTAAAAATATAACCTTTATTCAGATGAAGATCATGGCCATTGCTTTGCTGTGCAATTTTCAGTTTGAGGTGGTGGAAGGGCATAATAATGTGTGTCCATGTGTTTCTGTTGTGCTTCACATGAAACATGGCTTGAAGGTCAAGGTTACTAAAAGAGGCATTATTAATTAG 1491 0.389 MDFLDFILIFVAIASFLFIHTWRSNRKNPIINLRFFGMLPSVLCNLSNIHDHATTTLKQCGGTFLFKGPWFTNLNFLITSDPMNVHHITSKNFDNYIKGSEYYEIFEILGDGIFNTDSHKWKHSRNILHSLFRQNSFESLVVKTIHKKLHSCLVPLLNDVSESGTVVDLQDIFQRISFDNICSIVLGFDPKSLPNKLIEFPEVAFEKAFNMAEDAIFYRHLVPRFLWKLQKWLQIGQGKTYTECEKIVDQFLHQCISSTFQEKSKVKCTKDDDEPTFNMLKALVEESGMEQIDRKDTISSSLSWFFWLVSTHPVVEAKILEEIRANFITKEEYWLITSRLENLNKLVYLHGAMCEALRLFPPVPFEHKSAVKSDILPSGHRVNANSMVIYSLYSMGRMEQTWGEDCLEFKPERWVSEKGSIIHIPSYKFIAFNAGPRSCLGKNITFIQMKIMAIALLCNFQFEVVEGHNNVCPCVSVVLHMKHGLKVKVTKRGIIN* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0939 496 Pfam Cytochrome P450 73 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0939 496 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Amo13g0939 496 PRINTS P450 superfamily signature 439 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0939 496 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0939 496 PRINTS P450 superfamily signature 293 310 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0939 496 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0939 496 PRINTS E-class P450 group I signature 302 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0939 496 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0939 496 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0939 496 PANTHER CYTOCHROME P450 FAMILY PROTEIN 9 493 - -
Amo13g0939 496 Gene3D Cytochrome P450 19 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0939 496 PANTHER CYTOCHROME P450 9 493 - -
Amo13g0939 496 SUPERFAMILY Cytochrome P450 29 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0939 Amo-Chr13 11508818 11510350 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0939 1 493 Cytochrome P450 AT2G23180 42.278 3.40e-149 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0939 - - adu:107477001 560.066