Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0938 ATGGACTTCTTAGAGCTTATTGCTATTCTTGCAGCCATTGTCTCATTCTTCTTTATCCACACATGGAGGTCTAATAGAAATAACCGCCTCACCAATTGGCCCTTCTTTGGTATGCTTCCAGGGACTTTATGTAATCTTTCCAATATCCATGATCACACAACAACCAATTTGAAGCAATGTGGAGGTACTTTTTTGTTCAAAGGCCCCTGGTTCACAAACCACAACTTTCTCATCACCAGTGATCCTATGAATGTGCACCACATTACTAGCAAGAACTTTGACAACTACATCAAAGGCTCTGAGTTCTATGAGATCTTTGAAATACTCGGAGATGGTATCTTTAACACTGATTCCCACAAATGGAAGCATAATAGGAACATACTACATTCATTGTTCAGACAAAACTCGTTTGAGAGTTTAGTGGTCAAAACCATTCATAAGAAGCTCCACAGTTGCCTAGTTCCACTTCTCAATGATGTATCAGAATCAGGAACTGTTGTGGACTTGCAAGACATCTTTCAGAGAATCAGTTTTGACAACATCTGCTCCATAGTGTTGGGGTTTGATCCTAAATCCCTTCCTAACAAGCTCATCGAGTTCCCGGAAGTTGCTTTCGAGAAAGCTTTCAACATGATGGAGGATGTAATGTTTTACAGACACATTGTCCCAAGATTTGTGTGGAAGCTTCAGAAATGGCTCCAAATTGGACGAGGGAAGAGCTACACTGAATGTGAAAAAATAATTGACCAATTCTTGCATCAGTGTATATCATCTACATTCCAAGAGAAAAGCAAAGTCAATTGCACCAAAGATGATGATGAACCAACATTTAACATGCTCAAAGCTCTTGTGGAGGAAAGTGGAATGGAACAAATAGATCGCAAGTTTCTAAGAGACAATGCATTGACTCTGTTAGCAGCAGGAAGGGATACAATTAGTTCAAGTCTCAGTTGGTTTTTCTGGCTAGTTTCAACCCACCCTGTTGTTGAAGCCAAAATCCTTGAAGAAATCAGAGCAAACTTTATAACCAAAGAAGAATATTGGCTCATCACTTCAAGATTAGAAAATCTTAACAAGCTAGTTTACCTGCATGGAGCTTTGTGTGAAGCATTGAGACTTTTTCCTGCAGTTCCTTTTGAGCACAAATGTGCAGTTAAATCTGATGTACTCCCTAGTGGACATCGTGTTAATGCAAATACTATTGTAATTTACTCTCCATATTCAATGGGAAGAATGGAACAAATATGGGGAGAAGATTGCTTGGAGTTTAAGCCAGAGAGGTGGATTTCTGAAAAGGGAAGCATCATACACATACCATCTTACAAGTTCATAGCTTTCAATGCAGGCCCAAGAAGTTGTTTGGGTAAAAATATAACCTTTATTCAGATGAAGATCATCGCCATTGCTTTGCTCTGCAATTTTCAGTTTGAGGTGGTGGAAGGGCATAATGTGTGTCCATGTGTTTCTATTATTCTTCACATGAAACATGGCTTGAAGGTCAAGGTTACTAAAAGAGGTATTAATAATTAG 1530 0.3895 MDFLELIAILAAIVSFFFIHTWRSNRNNRLTNWPFFGMLPGTLCNLSNIHDHTTTNLKQCGGTFLFKGPWFTNHNFLITSDPMNVHHITSKNFDNYIKGSEFYEIFEILGDGIFNTDSHKWKHNRNILHSLFRQNSFESLVVKTIHKKLHSCLVPLLNDVSESGTVVDLQDIFQRISFDNICSIVLGFDPKSLPNKLIEFPEVAFEKAFNMMEDVMFYRHIVPRFVWKLQKWLQIGRGKSYTECEKIIDQFLHQCISSTFQEKSKVNCTKDDDEPTFNMLKALVEESGMEQIDRKFLRDNALTLLAAGRDTISSSLSWFFWLVSTHPVVEAKILEEIRANFITKEEYWLITSRLENLNKLVYLHGALCEALRLFPAVPFEHKCAVKSDVLPSGHRVNANTIVIYSPYSMGRMEQIWGEDCLEFKPERWISEKGSIIHIPSYKFIAFNAGPRSCLGKNITFIQMKIIAIALLCNFQFEVVEGHNVCPCVSIILHMKHGLKVKVTKRGINN* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0938 509 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0938 509 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0938 509 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0938 509 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0938 509 SUPERFAMILY Cytochrome P450 19 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0938 509 Pfam Cytochrome P450 31 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0938 509 Gene3D Cytochrome P450 17 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0938 509 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0938 509 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0938 509 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0938 509 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0938 509 PANTHER CYTOCHROME P450 FAMILY PROTEIN 9 506 - -
Amo13g0938 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Amo13g0938 509 PANTHER CYTOCHROME P450 9 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0938 Amo-Chr13 11481375 11482904 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0938 1 506 Cytochrome P450 AT2G23180 44.487 6.08e-161 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0938 - - gmx:100791312 600.127