Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0935 ATGATGAGCTTGCTTGAGTTTGTTATTGTATTTGTAGCCATTCTCTTATTCTTTTTCATCCATCTTTGGAGGTGCAATAGAAATACCCCCCTCACATATTGGCCCTTAATTGGTATGCTACCAGGGATTTTGTGTAATTTGCCCAATATCCATGATCACCTTACCTCAGTCTTGAAACACCATGGAGGTACTTTTAAGTTTAGAGGACCTTGGCTCACAAACATTAACTTTGTCCTCACCAGTGATCCTATGAACGTGCACCACATTACAAGCAAGAACTTTGGCAACTATGGCAAAGGTTCTGAGTTCCACGAGATTTTTGAGATTTTGGGAGACGGAATATTCAATTCTGACTCCCATAAATGGAAGTACAACAGAGATATACTGCAATTATTGTTCAGACAAAACGTCTTCAAGAATGTTGTTCAAAAAGTTAGTCATAAGAAGCTGGAGAGTTGCTTGATTCCACTTCTCAATCATGCTTCAGAATCAGGAAGTGTTGTGGACTTGCAAGACATGTTTCAGAGGTTAACCTTTGACAGCATATGCTCCATTGTGTTGGGATTCGATCCTAAATGCCTTCCCAACAATCCCACTGAATTCCAAGAGGTTGCTTTTGAGAAAGCTTTCAACAAAATGGAAGATACAATCTTCTACAGACACATTGTCCCAAGGTGTTTGTGGAAGCTACAAAAACGACTCCGAATTGGACAAGAGAAGAACTCCAATGAATCCCAACAAATTGTTGACCAATTCTTGCACCAATGTATATCATCAAGAAATGAAGAGCAAAGCGGAGTCAATTGCGCGAAAGATGATGAATCAAACTTTGATATGCTAAAAGCTCTTGTGGAGGAACGAGGAATCGGACAAATAAACGACAAGTTTCTAAAAGACACGGCGATTAATCTCCTTGCAGCAGGCAGGGACACAATTAGTGCATGTCTTAGTTGGTTCTTTTGGCTTGTTTCAACTCATCCTTTTGTTGAAGCTAAGATCCTTGAAGAAATCAAAGAAAAGTTGAGAACCAATGATGAGAATTGGCTTGCTTCAGGGGTGGAAGATCTTAACAAGCTAGTTTACCTGCATGGAGCTCTATGTGAAACTCTCAGACTCTTCCCTCCAGTGCCATTTGAGCACAAATGTGCCATCAAATCTGATATACTTCCAAGTGGAGATTGTGTTAGTCCAAATACTATGATCTATTACTCTCTGTACTCAATGGGAAGAATGGAACAAACATGGGGAAAAGATTGCTTGGAATTCAAGCCAGAAAGGTGGGTTTCGGAAAAAGGAATCAATATACACATACCATCATACAAATTCATAGCTTTTAATGCAGGCCCAAGAAGTTGTTTGGGAAAAAGTATAAGCTTCATTCAGATGAAGATCATTGCCATTGCTTTGCTGTGGAACTTTCAGTTTCAGGTGGTAGAAGGCCATAATGTTTGTCCAAGTGTTTCTGTTGTCCTTCACATGAAACATGGCTTGAAGTTTAACCGTGTGATTTCTTATCTTGAAATATAG 1527 0.3949 MMSLLEFVIVFVAILLFFFIHLWRCNRNTPLTYWPLIGMLPGILCNLPNIHDHLTSVLKHHGGTFKFRGPWLTNINFVLTSDPMNVHHITSKNFGNYGKGSEFHEIFEILGDGIFNSDSHKWKYNRDILQLLFRQNVFKNVVQKVSHKKLESCLIPLLNHASESGSVVDLQDMFQRLTFDSICSIVLGFDPKCLPNNPTEFQEVAFEKAFNKMEDTIFYRHIVPRCLWKLQKRLRIGQEKNSNESQQIVDQFLHQCISSRNEEQSGVNCAKDDESNFDMLKALVEERGIGQINDKFLKDTAINLLAAGRDTISACLSWFFWLVSTHPFVEAKILEEIKEKLRTNDENWLASGVEDLNKLVYLHGALCETLRLFPPVPFEHKCAIKSDILPSGDCVSPNTMIYYSLYSMGRMEQTWGKDCLEFKPERWVSEKGINIHIPSYKFIAFNAGPRSCLGKSISFIQMKIIAIALLWNFQFQVVEGHNVCPSVSVVLHMKHGLKFNRVISYLEI* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0935 508 Gene3D Cytochrome P450 29 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0935 508 Pfam Cytochrome P450 32 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0935 508 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0935 508 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0935 508 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0935 508 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0935 508 PANTHER CYTOCHROME P450 FAMILY PROTEIN 10 501 - -
Amo13g0935 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Amo13g0935 508 PANTHER CYTOCHROME P450 10 501 - -
Amo13g0935 508 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0935 508 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0935 508 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0935 508 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g0935 508 SUPERFAMILY Cytochrome P450 20 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0935 Amo-Chr13 11441572 11443253 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0935 2 498 Cytochrome P450 AT2G23180 42.436 5.90e-159 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0935 - - adu:107477001 604.364