Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0928 ATGGTCGTGACCTTTGCCCCCACTGGACTCCAGACTGAGGTTAAGTCTGTGGAGATGCACCATGAGTCTCTCCCTGAGGCTCTCCCTGGTGACAATGTTGGTTTCAATGTTAAGAATGTTTCTGTGAAGGAGTTGAAGCGTGGCTTTGTTGCTTCTAACTCAAAGGATGATCCTGCTAAGGAGGCTGGAAGCTTCACCTCTCAATTTGCTGAGCTCCAGACCAAGATTGATAGGCGTTCTGGCAAAGAGCTCGAGAAGGAGCCCAAGTTTCTTAAGAATGGTGATGCTGGTATGGTGAAGATGATTCCCACAAAGCCAATGGTTGTTGAGACTTTTGCTGAGTACCCTCCACTTGGAAGGTTTGCTGTGAGGGACATGCGTCAAACTGTTGCTGTTGGTGTCATCAAGAGCGTTGAGAAGAAGGATGCTTCTGCTAAGATCACTAAATCTGCTGCCAAGAAAGCTGCCAAATGA 474 0.4768 MVVTFAPTGLQTEVKSVEMHHESLPEALPGDNVGFNVKNVSVKELKRGFVASNSKDDPAKEAGSFTSQFAELQTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFAEYPPLGRFAVRDMRQTVAVGVIKSVEKKDASAKITKSAAKKAAK* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0928 157 Gene3D Translation factors 1 60 - -
Amo13g0928 157 SUPERFAMILY Translation proteins 1 58 IPR009000 -
Amo13g0928 157 Pfam Elongation factor Tu C-terminal domain 66 138 IPR004160 -
Amo13g0928 157 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 66 138 IPR009001 -
Amo13g0928 157 PANTHER ELONGATION FACTOR 1-ALPHA 68 155 - -
Amo13g0928 157 PANTHER ELONGATION FACTOR 1-ALPHA 1 68 - -
Amo13g0928 157 Gene3D Translation factors 61 139 - -
Amo13g0928 157 PANTHER TRANSLATION FACTOR 68 155 - -
Amo13g0928 157 PANTHER TRANSLATION FACTOR 1 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0928 Amo-Chr13 11389052 11389837 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0928 1 148 Eukaryotic Initiation Factors Gene Family AT5G60390 73.446 1.57e-83 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0928 K03231 - smo:SELMODRAFT_270693 236.884