Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0925 AGCAGCAAGCATTTTGCAGAAGCCGAATCAGTGAGAGAAGCTTGCAACGCAGATATGGCTCCTAAACGAGGTGGAAAAGCGCCAGTTCCAGCTTCGAAGAAGAAGCCTGAGAAGGTTACGAACCCGTTGTTCGAGAAGCGTCCTAAGCAGTTCGGGATCGGAGGAGCATTGCCGCCAAAGAGGGATTTGACTCGTTTTGTGAAGTGGCCTAAGACCGTACAAATCCAGAGGAAGAAGAGGATCCTCAAGCAGAGGTTGAAGGTTCCACCAGCTTTGAACCAGTTCACCAAGACCCTTGACAAGAACCTTGCAACCAGCCTTTTCAAGATACTTCTGAAGTACAGGCCAGAGGATAAAGCTGAAAAGAAGGAGCGACTTTTGAAAAGGGCCCAGGCCGAGACTGAGGGCAAAACCGTTGAAGCTAAAAAGCCTATTGTTGTGAAGTATGGTCTCAATCACGTTACCTACCTTATTGAGCAGAACAAAGCTCAGTTGGTTGTGATTGCTCATGATGTGGACCCAATTGAATTGGTTGTCTGGCTTCCCGCATTGTGTAGGAAGATGGAAATTCCATACTGCATTGTCAAGGGCAAGGCTCGCCTTGGATCGATTGTACACAAGAAAACGGCATCTGTTTTGTGCTTGACCAGTGTCAAGAACGAAGACAAATTAGAGTTCAGCAGGGTCCTAGAGGCTATCAAGGCTAACTTCAATGACAAGTATGATGAGTACAGAAAGAAATGGGGTGGCGGTATCATGGGTTCTAAATCCCAAGCCAAAACTAAGGCAAAGGAGAGGCTTCTTGCTAAGGAGGCTGCTCAGAGGATGTCTTAA 834 0.4712 SSKHFAEAESVREACNADMAPKRGGKAPVPASKKKPEKVTNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKTVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATSLFKILLKYRPEDKAEKKERLLKRAQAETEGKTVEAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGSIVHKKTASVLCLTSVKNEDKLEFSRVLEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMS* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0925 277 SUPERFAMILY L30e-like 107 248 IPR029064 -
Amo13g0925 277 PRINTS Ribosomal protein L7A/RS6 family signature 182 192 IPR018492 -
Amo13g0925 277 PRINTS Ribosomal protein L7A/RS6 family signature 147 161 IPR018492 -
Amo13g0925 277 PRINTS Ribosomal protein L7A/RS6 family signature 166 179 IPR018492 -
Amo13g0925 277 PRINTS Ribosomal protein L7A/RS6 family signature 192 206 IPR018492 -
Amo13g0925 277 MobiDBLite consensus disorder prediction 1 41 - -
Amo13g0925 277 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 12 275 - -
Amo13g0925 277 ProSitePatterns Ribosomal protein L7Ae signature. 185 202 IPR004037 GO:0042254|GO:1990904
Amo13g0925 277 PANTHER - 12 275 - -
Amo13g0925 277 PRINTS Ribosomal protein L7A family signature 48 65 IPR001921 -
Amo13g0925 277 PRINTS Ribosomal protein L7A family signature 109 122 IPR001921 -
Amo13g0925 277 PRINTS Ribosomal protein L7A family signature 236 256 IPR001921 -
Amo13g0925 277 PRINTS Ribosomal protein L7A family signature 143 163 IPR001921 -
Amo13g0925 277 PRINTS Ribosomal protein L7A family signature 204 228 IPR001921 -
Amo13g0925 277 PRINTS Ribosomal protein L7A family signature 65 82 IPR001921 -
Amo13g0925 277 PRINTS Ribosomal protein L7A family signature 85 104 IPR001921 -
Amo13g0925 277 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 134 224 IPR004038 -
Amo13g0925 277 Gene3D - 69 252 IPR029064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0925 Amo-Chr13 11356369 11358562 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0925 19 277 Cytoplasmic Ribosomal Protein Gene Family AT3G62870 85.714 1.43e-168 465